RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 KIAA1549LQ6ZVL6 1849 aa7.06□□□□□ -1.28
TMEM116-208ENST00000549537 LAMA1P25391 3075 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 MYO16Q9Y6X6 1858 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TRAV19A0A0A6YYK7 116 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 DCDC2BA2VCK2 349 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ZNF840PA6NDX5 716 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 A8MXQ7 604 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ICMTO60725 284 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 PHACTR2O75167 634 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 KIF20AO95235 890 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 PAPSS2O95340 614 aaPredicted RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 OAS1P00973 400 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 LMNAP02545 664 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 USP17L7P0C7H9 530 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 FAM157BP0CG42 384 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TRIM49P0CI25 452 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TRIM49CP0CI26 452 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 PFKLP17858 780 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 CD33P20138 364 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 VAMP7P51809 220 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 KPNA1P52294 538 aaPredicted RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 NUCB2P80303 420 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 SLC7A9P82251 487 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 CSTF1Q05048 431 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 INCA1Q0VD86 236 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ADAM9Q13443 819 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 MTF1Q14872 753 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 PON2Q15165 354 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TEAD4Q15561 434 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 EDRF1Q3B7T1 1238 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TRIM68Q6AZZ1 485 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 FSTL4Q6MZW2 842 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ZC3H14Q6PJT7 736 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 SCARA5Q6ZMJ2 495 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 Q6ZS52 159 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 CAPN12Q6ZSI9 719 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 INTS8Q75QN2 995 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 FAM186BQ8IYM0 893 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ADSSL1Q8N142 457 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 CRYBG2Q8N1P7 616 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ARL14EPQ8N8R7 260 aaPredicted RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ZMIZ2Q8NF64 920 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TAS1R2Q8TE23 839 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 OSCP1Q8WVF1 389 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 CCDC47Q96A33 483 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TRIM11Q96F44 468 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 SGSM3Q96HU1 749 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TWNKQ96RR1 684 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 KCNK16Q96T55 309 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 TGIF2Q9GZN2 237 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 RNF38Q9H0F5 515 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 EBF3Q9H4W6 596 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 CCSER2Q9H7U1 834 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 CSNK1G1Q9HCP0 422 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 RBM12Q9NTZ6 932 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 THG1LQ9NWX6 298 aaKnown RBP7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ZSCAN32Q9NX65 697 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ZDHHC3Q9NYG2 299 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 DCTN4Q9UJW0 460 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ARHGAP26Q9UNA1 814 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 FRMD4BQ9Y2L6 1034 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 PCDHGA2Q9Y5H1 932 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 USP3Q9Y6I4 520 aa7.05□□□□□ -1.28
TMEM116-208ENST00000549537 ELOA3CA0A087WX78 387 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 FAM92AA1XBS5 289 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 ELOA3DA6NLF2 546 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 K7ESF4 209 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 TRDMT1O14717 391 aaKnown RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 BEST1O76090 585 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 CKMP06732 381 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 ZDHHC11BP0C7U3 371 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 CCDC130P13994 396 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 HDCP19113 662 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 RPL13P26373 211 aaKnown RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 ANXA13P27216 316 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 HOXC13P31276 330 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 DNAJA1P31689 397 aaKnown RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 GTF2H1P32780 548 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 GJA4P35212 333 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 PSMC2P35998 433 aaKnown RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 PIK3CAP42336 1068 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 PRCPP42785 496 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 PPP3CCP48454 512 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 GCLMP48507 274 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 CCR3P51677 355 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 NDST1P52848 882 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 PMS1P54277 932 aaKnown RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 SATB1Q01826 763 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 TAF10Q12962 218 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 ORC1Q13415 861 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 LRRC32Q14392 662 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 PDGFRLQ15198 375 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 RSPO4Q2I0M5 234 aaPredicted RBP7.04□□□□□ -1.28
TMEM116-208ENST00000549537 GAB4Q2WGN9 574 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 PLEKHG6Q3KR16 790 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 ELOA3BQ3SY89 546 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 TMEM196Q5HYL7 178 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 DGKKQ5KSL6 1271 aa7.04□□□□□ -1.28
TMEM116-208ENST00000549537 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms