RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ACSS3Q9H6R3 686 aa14.65□□□□□ -0.06
CACNB3-209ENST00000548860 MTO1Q9Y2Z2 717 aaKnown RBP14.65□□□□□ -0.06
CACNB3-209ENST00000548860 SNX10Q9Y5X0 201 aa14.65□□□□□ -0.06
CACNB3-209ENST00000548860 VDRP11473 427 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 GARSP41250 739 aaKnown RBP14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ART3Q13508 389 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 XRRA1Q6P2D8 792 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 RHBDF2Q6PJF5 856 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 CDHR3Q6ZTQ4 885 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
CACNB3-209ENST00000548860 BTBD10Q9BSF8 475 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ETNK2Q9NVF9 386 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 DDIT4Q9NX09 232 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 BFARQ9NZS9 450 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 TUBGCP4Q9UGJ1 667 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 STARD13Q9Y3M8 1113 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 BTAF1O14981 1849 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 SPTLC1O15269 473 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 STAMBPO95630 424 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 LSM8O95777 96 aaKnown RBP14.64□□□□□ -0.07
CACNB3-209ENST00000548860 JCHAINP01591 159 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ETS2P15036 469 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 TSPAN8P19075 237 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ARL2P36404 184 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 AP3M2P53677 418 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 CYTH1Q15438 398 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 B3GNT9Q6UX72 402 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 UCMAQ8WVF2 138 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ZNF570Q96NI8 536 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 RNF157Q96PX1 679 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 PNPOQ9NVS9 261 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 TPST1O60507 370 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 MAFO75444 373 aaPredicted RBP14.64□□□□□ -0.07
CACNB3-209ENST00000548860 PSMB4P28070 264 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 KLF1Q13351 362 aaPredicted RBP14.64□□□□□ -0.07
CACNB3-209ENST00000548860 CGB2Q6NT52 195 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ZPBP2Q6X784 338 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 SLC4A11Q8NBS3 891 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 GSTCDQ8NEC7 633 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 TEKT4Q8WW24 435 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 KLRG1Q96E93 195 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ST6GALNAC4Q9H4F1 302 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 V9GYQ6 96 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 ANKRD12Q6UB98 2062 aa14.64□□□□□ -0.07
CACNB3-209ENST00000548860 MSCO60682 206 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 METTL18O95568 372 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 ITGAVP06756 1048 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 ZBTB48P10074 688 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 CYP2C9P11712 490 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 PKNOX1P55347 436 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 BOLA3Q53S33 107 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 PPP1R2P3Q6NXS1 205 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 SCUBE1Q8IWY4 988 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 LRRC43Q8N309 656 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 OR52K1Q8NGK4 314 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 APOPT1Q96IL0 206 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 KIAA1551Q9HCM1 1747 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 CYP2B6P20813 491 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 TPI1P60174 286 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 TNFAIP2Q03169 654 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 USP10Q14694 798 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 SPDYCQ5MJ68 293 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 RNF220Q5VTB9 566 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 RNF43Q68DV7 783 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 SPNS2Q8IVW8 549 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 TRIM42Q8IWZ5 723 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 DEFB107AQ8IZN7 70 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 PNPLA1Q8N8W4 532 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 OLIG1Q8TAK6 271 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 DNAJB3Q8WWF6 145 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 TEPSINQ96N21 525 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 OMDQ99983 421 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 DNAI2Q9GZS0 605 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 IARS2Q9NSE4 1012 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 BARX2Q9UMQ3 279 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 EEF2KO00418 725 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 TPP1O14773 563 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 NDC80O14777 642 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 CRCPO75575 148 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 PLIN5Q00G26 463 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 POU6F1Q14863 301 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 DLG2Q15700 870 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 EFHC2Q5JST6 749 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 STRA8Q7Z7C7 330 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 TFB1MQ8WVM0 346 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 WDR60Q8WVS4 1066 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 PEBP4Q96S96 227 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 CADM1Q9BY67 442 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 FOXP3Q9BZS1 431 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 NXF3Q9H4D5 531 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 XAB2Q9HCS7 855 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 BUD23O43709 281 aaKnown RBP14.63□□□□□ -0.07
CACNB3-209ENST00000548860 CSH1P0DML2 217 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 CSH2P0DML3 217 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 NUDT2P50583 147 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 IFNEQ86WN2 208 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 PLD5Q8N7P1 536 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 APPL2Q8NEU8 664 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 ALKBH8Q96BT7 664 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms