RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 C1orf228Q6PIY5 440 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 SCARA5Q6ZMJ2 495 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 FAM43BQ6ZT52 329 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 VSIG10LQ86VR7 867 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 DEFB107AQ8IZN7 70 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 PRICKLE1Q96MT3 831 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 ZNF341Q9BYN7 854 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 WDR46O15213 610 aaKnown RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 SORBS2O94875 1100 aaKnown RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 ENDOD1O94919 500 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 CNTFP26441 200 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 TTLL12Q14166 644 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 FAXCQ5TGI0 409 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 FBXW8Q8N3Y1 598 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 PPP4R1Q8TF05 950 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 USP6NLQ92738 828 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 RTP4Q96DX8 246 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 PORCNQ9H237 461 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 Q9H521 79 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 JPH1Q9HDC5 661 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 CTDP1Q9Y5B0 961 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 ASNSP08243 561 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 SMIM18P0DKX4 95 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 KCNA2P16389 499 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 FDFT1P37268 417 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 MAGEA6P43360 314 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 B3GNT6Q6ZMB0 384 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 MARVELD2Q8N4S9 558 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.89■■□□□ 1.42
NPAS3-206ENST00000548645 DNAJC28Q9NX36 388 aa23.89■■□□□ 1.42
NPAS3-206ENST00000548645 TBC1D12O60347 775 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 GRM1Q13255 1194 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 OGFRL1Q5TC84 451 aaPredicted RBP23.89■■□□□ 1.41
NPAS3-206ENST00000548645 TRMT10BQ6PF06 316 aaKnown RBP23.89■■□□□ 1.41
NPAS3-206ENST00000548645 TMC7Q7Z402 723 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 KBTBD6Q86V97 674 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 HPS6Q86YV9 775 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 MCUQ8NE86 351 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 DEPDC1BQ8WUY9 529 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 CPXM1Q96SM3 734 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 MMP19Q99542 508 aa23.89■■□□□ 1.41
NPAS3-206ENST00000548645 ZNF70Q9UC06 446 aaPredicted RBP23.89■■□□□ 1.41
NPAS3-206ENST00000548645 ZNF646O15015 1829 aaPredicted RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 DENRO43583 198 aaKnown RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 CLPTM1O96005 669 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 FGF3P11487 239 aaPredicted RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 ITGAXP20702 1163 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 USP46P62068 366 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 RPL10AP62906 217 aaKnown RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 TCHHL1Q5QJ38 904 aaPredicted RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 PDPK2PQ6A1A2 396 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 GCNAQ96QF7 691 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 INPP5FQ9Y2H2 1132 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 FAM189A1O60320 539 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 TOP3BO95985 862 aaKnown RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 ZBED1O96006 694 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 GSRP00390 522 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 NR3C2P08235 984 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 ALDH1A3P47895 512 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 IDH3AP50213 366 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 TBL3Q12788 808 aaKnown RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 MYBPC3Q14896 1274 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 DUOXA2Q1HG44 320 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 KCNK16Q96T55 309 aa23.88■■□□□ 1.41
NPAS3-206ENST00000548645 EBNA1BP2Q99848 306 aaKnown RBP23.88■■□□□ 1.41
NPAS3-206ENST00000548645 H3BNX3 289 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 FAM200BP0CF97 657 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ACTR2P61160 394 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 SNAPC2Q13487 334 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ZNF699Q32M78 642 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 RBM44Q6ZP01 1051 aaKnown RBP23.87■■□□□ 1.41
NPAS3-206ENST00000548645 SHCBP1LQ9BZQ2 653 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 TELO2Q9Y4R8 837 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ITGBL1O95965 494 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ERBB2P04626 1255 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 SERPINE1P05121 402 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ACAT1P24752 427 aaKnown RBP23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ABHD15Q6UXT9 468 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ACMSDQ8TDX5 336 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 RNF157Q96PX1 679 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 C6orf203Q9P0P8 240 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-206ENST00000548645 CAPN8A6NHC0 703 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 VILLO15195 856 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 STRNO43815 780 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 GLRA3O75311 464 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 RBL1P28749 1068 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 TNFSF9P41273 254 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 INHBCP55103 352 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 HSP90AA5PQ58FG0 334 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 FAM182AQ5T1J6 154 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 SMYD5Q6GMV2 418 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 C16orf46Q6P387 395 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 POTEAQ6S8J7 498 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 PEBP4Q96S96 227 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 ARHGAP26Q9UNA1 814 aa23.87■■□□□ 1.41
NPAS3-206ENST00000548645 BTBD19C9JJ37 291 aa23.86■■□□□ 1.41
NPAS3-206ENST00000548645 EDN1P05305 212 aa23.86■■□□□ 1.41
NPAS3-206ENST00000548645 GRK2P25098 689 aa23.86■■□□□ 1.41
NPAS3-206ENST00000548645 TLR1Q15399 786 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms