RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 NFU1Q9UMS0 254 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 C19orf53Q9UNZ5 99 aaPredicted RBP4.71□□□□□ -1.66
PTCH1-216ENST00000548379 LRRFIP2Q9Y608 721 aaKnown RBP4.71□□□□□ -1.66
PTCH1-216ENST00000548379 H0Y3Z8 333 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 M0QZQ0 153 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 PSMD9O00233 223 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 NCAM2O15394 837 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 RPP40O75818 363 aaKnown RBP4.7□□□□□ -1.66
PTCH1-216ENST00000548379 CER1O95813 267 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 ADRB1P08588 477 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 ELFN1P0C7U0 828 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 TMEM225BP0DP42 221 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 MAKP20794 623 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 DGKQP52824 942 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 SEC24CP53992 1094 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 PRKAA2P54646 552 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 FOXI1Q12951 378 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 MPP3Q13368 585 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 DNASE1L3Q13609 305 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 BTBD16Q32M84 506 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 ALFQ53S48 1182 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 MTHFD1LQ6UB35 978 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 DPY19L3Q6ZPD9 716 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 PARS2Q7L3T8 475 aaKnown RBP4.7□□□□□ -1.66
PTCH1-216ENST00000548379 ZNF551Q7Z340 670 aaPredicted RBP4.7□□□□□ -1.66
PTCH1-216ENST00000548379 WDR53Q7Z5U6 358 aaPredicted RBP4.7□□□□□ -1.66
PTCH1-216ENST00000548379 CCDC117Q8IWD4 279 aaPredicted RBP4.7□□□□□ -1.66
PTCH1-216ENST00000548379 IL17REQ8NFR9 667 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 OR6Y1Q8NGX8 325 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 XAGE5Q8WWM1 108 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 TRIM63Q969Q1 353 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 RILPL2Q969X0 211 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 PDLIM2Q96JY6 352 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 TBATAQ96M53 351 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 FAM167BQ9BTA0 163 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 FSD1LQ9BXM9 530 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 G6PC2Q9NQR9 355 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 ARHGEF3Q9NR81 526 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 C9orf78Q9NZ63 289 aaPredicted RBP4.7□□□□□ -1.66
PTCH1-216ENST00000548379 PDP2Q9P2J9 529 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 ZNF69Q9UC07 566 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 FEM1BQ9UK73 627 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 REXO2Q9Y3B8 237 aaKnown RBP4.7□□□□□ -1.66
PTCH1-216ENST00000548379 UGGT2Q9NYU1 1516 aa4.7□□□□□ -1.66
PTCH1-216ENST00000548379 CCDC151A5D8V7 595 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 NPHP1O15259 732 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 URI1O94763 535 aaPredicted RBP4.69□□□□□ -1.66
PTCH1-216ENST00000548379 TK1P04183 234 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 DLDP09622 509 aaKnown RBP4.69□□□□□ -1.66
PTCH1-216ENST00000548379 NR2F6P10588 404 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 ADRA1DP25100 572 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 GRIA3P42263 894 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 TPTEP56180 551 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 E2F1Q01094 437 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 SMAD1Q15797 465 aaKnown RBP4.69□□□□□ -1.66
PTCH1-216ENST00000548379 KAZNQ674X7 775 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 CCDC144NLQ6NUI1 221 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 ANKRD16Q6P6B7 361 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 PTCHD4Q6ZW05 846 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 PEG10Q86TG7 708 aaKnown RBP4.69□□□□□ -1.66
PTCH1-216ENST00000548379 TTC30AQ86WT1 665 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 FTSJ3Q8IY81 847 aaKnown RBP4.69□□□□□ -1.66
PTCH1-216ENST00000548379 ULK2Q8IYT8 1036 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 LCORLQ8N3X6 602 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 LRRC71Q8N4P6 559 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 SIMC1Q8NDZ2 872 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 MCRS1Q96EZ8 462 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 LENG8Q96PV6 779 aaPredicted RBP4.69□□□□□ -1.66
PTCH1-216ENST00000548379 ABHD16BQ9H3Z7 469 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 DUSP22Q9NRW4 184 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 RRN3Q9NYV6 651 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 ASAP1Q9ULH1 1129 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 ZBTB1Q9Y2K1 713 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 SALL3Q9BXA9 1300 aa4.69□□□□□ -1.66
PTCH1-216ENST00000548379 A0A1B0GVC2 190 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 FAM90A20PA6NIJ5 464 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 EFCAB8A8MWE9 144 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 H0YIZ8 118 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 EIF3FO00303 357 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-216ENST00000548379 MATN3O15232 486 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 PPP6R2O75170 966 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 LARGE1O95461 756 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 CKMT1AP12532 417 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 CREB1P16220 341 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 AKT1P31749 480 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 GSTM5P46439 218 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 AVPR1BP47901 424 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 SUMO2P61956 95 aaKnown RBP4.68□□□□□ -1.66
PTCH1-216ENST00000548379 PSG6Q00889 435 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 DEUP1Q05D60 604 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 SEMA3BQ13214 749 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 CUL4BQ13620 913 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 FAM110CQ1W6H9 321 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 PLAC9Q5JTB6 97 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 CRIP3Q6Q6R5 217 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 ANKS1BQ7Z6G8 1248 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 VRK3Q8IV63 474 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 SLC44A3Q8N4M1 653 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 LINC01465Q8N7H1 131 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 PNPLA1Q8N8W4 532 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms