RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 PIP5K1BO14986 540 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 DHHO43323 396 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 PEX14O75381 377 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 GCATO75600 419 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 GPC5P78333 572 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 TFF2Q03403 129 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 SLC10A2Q12908 348 aaPredicted RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 CHAF1AQ13111 956 aaPredicted RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 CSHL1Q14406 222 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 PUM3Q15397 648 aaKnown RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 FAM187BQ17R55 369 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 ZACNQ401N2 412 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 CERKLQ49MI3 558 aaPredicted RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 PRAMEF17Q5VTA0 474 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 KIAA1614Q5VZ46 1190 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 SYCE2Q6PIF2 218 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 VSTM1Q6UX27 236 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 GATAD2AQ86YP4 633 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 NRSN1Q8IZ57 195 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 FAM71BQ8TC56 605 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 IPO4Q8TEX9 1081 aaKnown RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 WDR60Q8WVS4 1066 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 EID2BQ96D98 161 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 ZNF764Q96H86 408 aaPredicted RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 HS6ST2Q96MM7 605 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 ASB2Q96Q27 587 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 EIF3CQ99613 913 aaKnown RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 PRPF18Q99633 342 aaKnown RBP4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 PAAF1Q9BRP4 392 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 CRB3Q9BUF7 120 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 USP29Q9HBJ7 922 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 IGSF9Q9P2J2 1179 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
DEPDC4-205ENST00000548313 TISP43B9A030 160 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 PRRT4C9JH25 899 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 J3KTA2 159 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 SMIM22K7EJ46 135 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 NPC1O15118 1278 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 CTIFO43310 598 aaKnown RBP4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 CA12O43570 354 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 USP1O94782 785 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 LDHAP00338 332 aaKnown RBP4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 ANXA6P08133 673 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 ITGA5P08648 1049 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 DRD1P21728 446 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 YY1P25490 414 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 DUSP1P28562 367 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 ALDH18A1P54886 795 aaKnown RBP4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 PROK1P58294 105 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 LARS2Q15031 903 aaKnown RBP4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 PFKFB4Q16877 469 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 CCDC144NLQ6NUI1 221 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 TMEM65Q6PI78 240 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 DCDC5Q6ZRR9 648 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 PIK3AP1Q6ZUJ8 805 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 CHSY1Q86X52 802 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 MAFAQ8NHW3 353 aaPredicted RBP4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 POF1BQ8WVV4 589 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 PMM1Q92871 262 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 KAZALD1Q96I82 304 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 SEMA4CQ9C0C4 833 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 TP63Q9H3D4 680 aaPredicted RBP4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 OBP2BQ9NPH6 170 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 VPS45Q9NRW7 570 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 SEMA5BQ9P283 1151 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 NFU1Q9UMS0 254 aa4.82□□□□□ -1.64
DEPDC4-205ENST00000548313 GXYLT2A0PJZ3 443 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 MANSC4A6NHS7 340 aaPredicted RBP4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 CLIC1O00299 241 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 PCDH17O14917 1159 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 RBMXL2O75526 392 aaKnown RBP4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 ATF7P17544 494 aaPredicted RBP4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 MATN1P21941 496 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 BFSP2Q13515 415 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 KCNB1Q14721 858 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 PNLDC1Q8NA58 520 aaKnown RBP4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 HIC2Q96JB3 615 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 RITA1Q96K30 269 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 ADGRE3Q9BY15 652 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 RNF26Q9BY78 433 aaPredicted RBP4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 SAP30LQ9HAJ7 183 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 FLRT1Q9NZU1 646 aa4.81□□□□□ -1.64
DEPDC4-205ENST00000548313 LGALS16A8MUM7 142 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 TTC34A8MYJ7 566 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 TMEM232C9JQI7 657 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 MASP2O00187 686 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 SYT5O00445 386 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 PRAMEF2O60811 474 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 TAF5LO75529 589 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 LATS1O95835 1130 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 NHLRC4P0CG21 123 aaPredicted RBP4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 CERS1P27544 350 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 PDIA3P30101 505 aaKnown RBP4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 GALNSP34059 522 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 SERPINF1P36955 418 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 IGHMBP2P38935 993 aaKnown RBP4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 JAK3P52333 1124 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 FOXO1Q12778 655 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 BLMHQ13867 455 aa4.8□□□□□ -1.64
DEPDC4-205ENST00000548313 MFSD13AQ14CX5 517 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms