RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 FEZF2Q8TBJ5 459 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF564Q8TBZ8 553 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 C18orf25Q96B23 403 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 TMEM165Q9HC07 324 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 C6orf203Q9P0P8 240 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 HMGXB4Q9UGU5 601 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 SKAP2O75563 359 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 TGDSO95455 350 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 CTHP32929 405 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 DAB2P98082 770 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 MYO1EQ12965 1108 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 PIGHQ14442 188 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 TDRD12Q587J7 1177 aaKnown RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 GNASQ5JWF2 1037 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 KIAA0319Q5VV43 1072 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 PM20D1Q6GTS8 502 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 HIBCHQ6NVY1 386 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 OTOP3Q7RTS5 596 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 SLC44A2Q8IWA5 706 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 DPF3Q92784 378 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF689Q96CS4 500 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF333Q96JL9 665 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 HSFY1Q96LI6 401 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 TMEM175Q9BSA9 504 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 TACO1Q9BSH4 297 aaKnown RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 NUP85Q9BW27 656 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ALG13Q9NP73 1137 aaKnown RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 SLC12A4Q9UP95 1085 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF106Q9H2Y7 1883 aaKnown RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ARL5CA6NH57 179 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 SRRM3A6NNA2 597 aaPredicted RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 MUSKO15146 869 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 FBXO24O75426 580 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 MICAL2O94851 1124 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 OAZ2O95190 189 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 AIF1P55008 147 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 OGDHQ02218 1023 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 TNK2Q07912 1038 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 DHX34Q14147 1143 aaKnown RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 PTPN20Q4JDL3 420 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 SEZ6Q53EL9 994 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 OTUD1Q5VV17 481 aaPredicted RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 TRNP1Q6NT89 227 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 CYB5D1Q6P9G0 228 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 COLGALT2Q8IYK4 626 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ANKRD52Q8NB46 1076 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 TMEM35BQ8NCS4 154 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 CHAC2Q8WUX2 184 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 GPATCH1Q9BRR8 931 aaKnown RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 OBP2AQ9NY56 170 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 AMFRQ9UKV5 643 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 PTCH2Q9Y6C5 1203 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 C2CD4BA6NLJ0 364 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 KPNA7A9QM74 516 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 XPO1O14980 1071 aaKnown RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ZBTB24O43167 697 aaPredicted RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 BAIAP3O94812 1187 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 OAS1P00973 400 aaKnown RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 FOXK1P85037 733 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 DENND1BQ6P3S1 775 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 TMEM270Q6UE05 265 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 CXCL17Q6UXB2 119 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 FAM76AQ8TAV0 307 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 SUSD3Q96L08 255 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 MRPL45Q9BRJ2 306 aaKnown RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 IMPG2Q9BZV3 1241 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 MIS12Q9H081 205 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ACP6Q9NPH0 428 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 RBM12Q9NTZ6 932 aaKnown RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ZDHHC18Q9NUE0 388 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 MIOSQ9NXC5 875 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 SUN2Q9UH99 717 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ITGB1BP2Q9UKP3 347 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 PCDHB4Q9Y5E5 795 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 MACROD2A1Z1Q3 448 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 PPEF2O14830 753 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 LINC00271P0C7V0 271 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 COMTP21964 271 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 GRK4P32298 578 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 MAGEA6P43360 314 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 CARSP49589 748 aaKnown RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 SCAPQ12770 1279 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 RPS6KA1Q15418 735 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 TNFAIP8L3Q5GJ75 292 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF618Q5T7W0 954 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 DUPD1Q68J44 220 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 RHBDF2Q6PJF5 856 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 SLC26A9Q7LBE3 791 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 IRGQQ8WZA9 623 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 RELTQ969Z4 430 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 IFT43Q96FT9 208 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF317Q96PQ6 595 aaPredicted RBP7.53□□□□□ -1.2
TMEM116-206ENST00000548283 CCT8L2Q96SF2 557 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 DSEQ9UL01 958 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 PADI3Q9ULW8 664 aa7.53□□□□□ -1.2
TMEM116-206ENST00000548283 AGAP1Q9UPQ3 857 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms