RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TIPRLO75663 272 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 INMTO95050 263 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 PRKCGP05129 697 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 MYCLP12524 364 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 CST5P28325 142 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 GRIA3P42263 894 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 COPAP53621 1224 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 DCAF7P61962 342 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 SLC12A1Q13621 1099 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 BOP1Q14137 746 aaKnown RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 DLGAP5Q15398 846 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 ARHGAP15Q53QZ3 475 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 FCRLBQ6BAA4 426 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 NEK10Q6ZWH5 1172 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 MICU3Q86XE3 530 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 TSPYL6Q8N831 410 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 GLIS1Q8NBF1 620 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 NSUN7Q8NE18 718 aaKnown RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 OTUD7AQ8TE49 926 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 TFAP2BQ92481 460 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 DPF1Q92782 380 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 SCAMP4Q969E2 229 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 RILPL2Q969X0 211 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 EID2BQ96D98 161 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 RRP36Q96EU6 259 aaKnown RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 TREX2Q9BQ50 279 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 A1CFQ9NQ94 594 aaKnown RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 KRT84Q9NSB2 600 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 HECW2Q9P2P5 1572 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 SPATA31A3Q5VYP0 1347 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 CCDC195A0A1B0GUA6 201 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 B4DLN1 442 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 ACTL6BO94805 426 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 TXNP10599 105 aaKnown RBP4.77□□□□□ -1.65
SCAF11-210ENST00000547654 HOXB6P17509 224 aaKnown RBP4.77□□□□□ -1.65
SCAF11-210ENST00000547654 IL1R2P27930 398 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 GABRB3P28472 473 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 AARSP49588 968 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF11-210ENST00000547654 TUBP50607 506 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 SOX10P56693 466 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 MYBPC2Q14324 1141 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 KRT32Q14532 448 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 HLXQ14774 488 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-210ENST00000547654 MFSD4BQ5TF39 518 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 CPOQ8IVL8 374 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 TOR1AIP2Q8NFQ8 470 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 SMCR8Q8TEV9 937 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-210ENST00000547654 COG8Q96MW5 612 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 C7orf26Q96N11 449 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 TTC14Q96N46 770 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 PACSIN1Q9BY11 444 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 LMAN2LQ9H0V9 348 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 CHST8Q9H2A9 424 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 SMURF2Q9HAU4 748 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 PREBQ9HCU5 417 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 INTS13Q9NVM9 706 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 CFAP97Q9P2B7 532 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 GPR34Q9UPC5 381 aa4.77□□□□□ -1.65
SCAF11-210ENST00000547654 A0A1W2PPH5 198 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 FAM170AA1A519 330 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 PGPEP1LA6NFU8 196 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 FAM155BO75949 473 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 RTN3O95197 1032 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 BMP15O95972 392 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 IL1R1P14778 569 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 NPPBP16860 134 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 DRG2P55039 364 aaKnown RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 NR1H2P55055 460 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 ACTR2P61160 394 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 AP2B1P63010 937 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 SLC10A2Q12908 348 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 CTBP1Q13363 440 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 PTPRRQ15256 657 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 FAM153CQ494X1 144 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 CD300EQ496F6 205 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 CFAP58Q5T655 872 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 ATPAF1Q5TC12 328 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 GALNT5Q7Z7M9 940 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 ANKRD23Q86SG2 305 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 AOPEPQ8N6M6 819 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 VGLL2Q8N8G2 317 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 ADAMTS18Q8TE60 1221 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 SPSB4Q96A44 273 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 HVCN1Q96D96 273 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 RSRC1Q96IZ7 334 aaKnown RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 RTKNQ9BST9 563 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 CCDC68Q9H2F9 335 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 TAF1DQ9H5J8 278 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 MLXIPQ9HAP2 919 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 ANKEF1Q9NU02 776 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 NKIRAS2Q9NYR9 191 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 ORC3Q9UBD5 711 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-210ENST00000547654 MID2Q9UJV3 735 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 CDYLQ9Y232 598 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 NEU2Q9Y3R4 380 aa4.76□□□□□ -1.65
SCAF11-210ENST00000547654 LAMC3Q9Y6N6 1575 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 ADM5C9JUS6 153 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms