RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF707Q96C28 371 aaPredicted RBP16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 ATXN3LQ9H3M9 355 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 DNMT3BQ9UBC3 853 aaKnown RBP16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 TLR6Q9Y2C9 796 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 HBS1LQ9Y450 684 aaKnown RBP16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 HYOU1Q9Y4L1 999 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 PCDHA3Q9Y5H8 950 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 TADA3O75528 432 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 OAS1P00973 400 aaKnown RBP16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 TCP1P17987 556 aaKnown RBP16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 CCR1P32246 355 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 CETN2P41208 172 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 CXCR3P49682 368 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 PGFP49763 221 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 RWDD2BP57060 319 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 ITIH3Q06033 890 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 RING1Q06587 406 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 EFEMP1Q12805 493 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 TRIP4Q15650 581 aaPredicted RBP16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 ZFYVE27Q5T4F4 411 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 ACBD5Q5T8D3 534 aaPredicted RBP16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 TMEM150AQ86TG1 271 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 ARFGAP1Q8N6T3 406 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 ZNF592Q92610 1267 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 NTAN1Q96AB6 310 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 TLR10Q9BXR5 811 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 WDCPQ9H6R7 721 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 CCSER2Q9H7U1 834 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 SLC12A6Q9UHW9 1150 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 RASAL2Q9UJF2 1139 aa16.48■□□□□ 0.23
TRAFD1-203ENST00000547063 DENND4CQ5VZ89 1909 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 ANAPC1Q9H1A4 1944 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 SYNJ2BP-COX16A0A087WUM0 186 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 TRAV19A0A0A6YYK7 116 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 A0A1W2PRU2 124 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 ENC1O14682 589 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 MDM4O15151 490 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 COCHO43405 550 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 GLP2RO95838 553 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 APOEP02649 317 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 TFE3P19532 575 aaPredicted RBP16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 TBX4P57082 545 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 SLC25A11Q02978 314 aaKnown RBP16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 TUBB2AQ13885 445 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 PPP2R5DQ14738 602 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 ERMARDQ5T6L9 678 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 SH3PXD2AQ5TCZ1 1133 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 OTUD1Q5VV17 481 aaPredicted RBP16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 PAPD7Q5XG87 772 aaKnown RBP16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 CES5AQ6NT32 575 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 TMC5Q6UXY8 1006 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 GRASPQ7Z6J2 395 aaPredicted RBP16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 GPR149Q86SP6 731 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 MAP7D3Q8IWC1 876 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 UNC45BQ8IWX7 931 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 KATNAL2Q8IYT4 538 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 ADAM32Q8TC27 787 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 LRCH3Q96II8 777 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 PBKQ96KB5 322 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 TUBB2BQ9BVA1 445 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 PIGVQ9NUD9 493 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 HCFC1R1Q9NWW0 138 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 COX16Q9P0S2 106 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 PCSK1NQ9UHG2 260 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 SFMBT1Q9UHJ3 866 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 OBSL1O75147 1896 aa16.47■□□□□ 0.23
TRAFD1-203ENST00000547063 SLC12A8A0AV02 714 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 CES2O00748 559 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 OLFM2O95897 454 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 ATP1A1P05023 1023 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 HDCP19113 662 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 ZNF135P52742 658 aaPredicted RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 TAS2R40P59535 323 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 PITX1P78337 314 aaPredicted RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 RBM10P98175 930 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 EIF4EBP2Q13542 120 aaPredicted RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 ADGRE1Q14246 886 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 CLUL1Q15846 466 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 CTC1Q2NKJ3 1217 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 EFHC2Q5JST6 749 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 NUGGCQ68CJ6 796 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 FAM131BQ86XD5 332 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 MIB1Q86YT6 1006 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 C12orf76Q8N812 135 aaPredicted RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 PLD4Q96BZ4 506 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 PABPC5Q96DU9 382 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 RBM41Q96IZ5 413 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 CARD9Q9H257 536 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 TASP1Q9H6P5 420 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 ZWILCHQ9H900 591 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 TRPC7Q9HCX4 862 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 WDR6Q9NNW5 1121 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 NUDT5Q9UKK9 219 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 SNX12Q9UMY4 172 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 MRPS23Q9Y3D9 190 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms