RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 ARHGEF26Q96DR7 871 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 CYFIP2Q96F07 1278 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 HES6Q96HZ4 224 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 TNIP3Q96KP6 325 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 HNRNPABQ99729 332 aaKnown RBP8.88□□□□□ -0.99
VPS29-203ENST00000546588 NAPGQ99747 312 aaPredicted RBP8.88□□□□□ -0.99
VPS29-203ENST00000546588 MRPL45Q9BRJ2 306 aaKnown RBP8.88□□□□□ -0.99
VPS29-203ENST00000546588 APOL6Q9BWW8 343 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 TLR10Q9BXR5 811 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 DNAI2Q9GZS0 605 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 WDR35Q9P2L0 1181 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 SLC6A14Q9UN76 642 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 COG5Q9UP83 839 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 SCINQ9Y6U3 715 aa8.88□□□□□ -0.99
VPS29-203ENST00000546588 FAM221BA6H8Z2 402 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 TRIM43BA6NCK2 446 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 M0R082 166 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 SYN3O14994 580 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 B4GALT3O60512 393 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 HUS1O60921 280 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 DGKIO75912 1065 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 DDHD2O94830 711 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 OAZ2O95190 189 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 B3GALT4O96024 378 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CALB1P05937 261 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ODC1P11926 461 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CD58P19256 250 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 USP8P40818 1118 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 PTPN20Q4JDL3 420 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ZNF569Q5MCW4 686 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 PERM1Q5SV97 790 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 FAM171BQ6P995 826 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ADAMTSL4Q6UY14 1074 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 NT5DC3Q86UY8 548 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 OSTM1Q86WC4 334 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ZDHHC17Q8IUH5 632 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ATL2Q8NHH9 583 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ZNF417Q8TAU3 575 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 SLC35G2Q8TBE7 412 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 SLC35F5Q8WV83 523 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CD101Q93033 1021 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 TOP1MTQ969P6 601 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ITFG2Q969R8 447 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 TRIM43Q96BQ3 446 aaPredicted RBP8.87□□□□□ -0.99
VPS29-203ENST00000546588 SCLYQ96I15 445 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 SENP8Q96LD8 212 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ZNF587Q96SQ5 575 aaPredicted RBP8.87□□□□□ -0.99
VPS29-203ENST00000546588 RTP3Q9BQQ7 232 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ACBD6Q9BR61 282 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 PAAF1Q9BRP4 392 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 EMILIN2Q9BXX0 1053 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 LRRC3Q9BY71 257 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 UBXN6Q9BZV1 441 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 MCOLN1Q9GZU1 580 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CSNK1G1Q9HCP0 422 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 MRPL47Q9HD33 250 aaKnown RBP8.87□□□□□ -0.99
VPS29-203ENST00000546588 PNPLA8Q9NP80 782 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ACTR10Q9NZ32 417 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CYTH4Q9UIA0 394 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CDC23Q9UJX2 597 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CDH9Q9ULB4 789 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 TTC7AQ9ULT0 858 aaPredicted RBP8.87□□□□□ -0.99
VPS29-203ENST00000546588 SNX12Q9UMY4 172 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 CEP83Q9Y592 693 aa8.87□□□□□ -0.99
VPS29-203ENST00000546588 ANAPC1Q9H1A4 1944 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 MACROD2A1Z1Q3 448 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 FAM221AA4D161 298 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 CTAGE9A4FU28 777 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 CYB561D2O14569 222 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 CTIFO43310 598 aaKnown RBP8.86□□□□□ -0.99
VPS29-203ENST00000546588 PALMO75781 387 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 MOCS3O95396 460 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 POMCP01189 267 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 ALBP02768 609 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 ATP1A1P05023 1023 aaKnown RBP8.86□□□□□ -0.99
VPS29-203ENST00000546588 FAM200BP0CF97 657 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 TCP1P17987 556 aaKnown RBP8.86□□□□□ -0.99
VPS29-203ENST00000546588 ITGB8P26012 769 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 ARNTP27540 789 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 CASQ1P31415 396 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 CYP2C18P33260 490 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 BCAT1P54687 386 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 PDCLQ13371 301 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 IKBKEQ14164 716 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 ZNF268Q14587 947 aaPredicted RBP8.86□□□□□ -0.99
VPS29-203ENST00000546588 PPP2R5EQ16537 467 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 TIGD5Q53EQ6 642 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 NAA35Q5VZE5 725 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 C20orf204Q6ZNR8 217 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 REC114Q7Z4M0 266 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 TMEM110Q86TL2 294 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 TTC30AQ86WT1 665 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 GPR65Q8IYL9 337 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 LRRC43Q8N309 656 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 CELF2-AS1Q8N7Q2 184 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 ANKRD52Q8NB46 1076 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 B3GALNT2Q8NCR0 500 aa8.86□□□□□ -0.99
VPS29-203ENST00000546588 KCTD13Q8WZ19 329 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms