RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ZNF598Q86UK7 904 aaKnown RBP12.42□□□□□ -0.42
CCDC38-202ENST00000546386 CSPG4P5Q96PW8 444 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 CRISPLD1Q9H336 500 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 NRDE2Q9H7Z3 1164 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 GOLGA8KD6RF30 607 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 APOC4-APOC2K7ER74 178 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 ENPP3O14638 875 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 ZBED1O96006 694 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 APOC2P02655 101 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 ODC1P11926 461 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 DNAJB2P25686 324 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 MAGEA4P43358 317 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 ROR1Q01973 937 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 PPP2R5EQ16537 467 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 SPNS2Q8IVW8 549 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 GIPC2Q8TF65 315 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 AUTS2Q8WXX7 1259 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 PRDM5Q9NQX1 630 aaPredicted RBP12.42□□□□□ -0.42
CCDC38-202ENST00000546386 OSER1Q9NX31 292 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 RSPH14Q9UHP6 348 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 TPX2Q9ULW0 747 aaKnown RBP12.42□□□□□ -0.42
CCDC38-202ENST00000546386 THSD7BQ9C0I4 1608 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 TBKBP1A7MCY6 615 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 APOL1O14791 398 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 RASGRF2O14827 1237 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 RGS16O15492 202 aaPredicted RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 MFSD11O43934 449 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 SPAG7O75391 227 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 METTL18O95568 372 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 RARGP13631 454 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 CA8P35219 290 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 PCK1P35558 622 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 LHX1P48742 406 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 HIBCHQ6NVY1 386 aaPredicted RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 LEKR1Q6ZMV7 388 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 MRPL10Q7Z7H8 261 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 UNC5BQ8IZJ1 945 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 GDAP1Q8TB36 358 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 PAIP2Q9BPZ3 127 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 WDR83Q9BRX9 315 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 KCNK9Q9NPC2 374 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 SLC17A6Q9P2U8 582 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 TDRD15B5MCY1 1934 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 DNALI1O14645 258 aaPredicted RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 ADAM12O43184 909 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 ZNF623O75123 536 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 FAM155BO75949 473 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 SPATA31D3P0C874 917 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 ACRP10323 421 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 CST5P28325 142 aaPredicted RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 DRG2P55039 364 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 HNRNPH2P55795 449 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 TLE2Q04725 743 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 STILQ15468 1287 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 SLC25A52Q3SY17 297 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 CES3Q6UWW8 571 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 SPATA31D4Q6ZUB0 917 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 METTL23Q86XA0 190 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 SRRM1Q8IYB3 904 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 BCL7CQ8WUZ0 217 aaPredicted RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 MAIP1Q8WWC4 291 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 FAF2Q96CS3 445 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 THOC1Q96FV9 657 aaKnown RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 SEPT5Q99719 369 aaPredicted RBP12.41□□□□□ -0.42
CCDC38-202ENST00000546386 APOL2Q9BQE5 337 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 TKTL2Q9H0I9 626 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 NMUR1Q9HB89 426 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 POPDC2Q9HBU9 364 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 RGS18Q9NS28 235 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 WHRNQ9P202 907 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 TRANK1O15050 2925 aa12.41□□□□□ -0.42
CCDC38-202ENST00000546386 WDR87Q6ZQQ6 2873 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 HHLA1C9JL84 531 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 TTC4O95801 387 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 SETSIPP0DME0 302 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 CCL5P13501 91 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 ITGB8P26012 769 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 SLC5A3P53794 718 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 DAOAP59103 153 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 GRIK3Q13003 919 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 TMED2Q15363 201 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 CLUL1Q15846 466 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 BOLA3Q53S33 107 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 INTS6LQ5JSJ4 861 aaKnown RBP12.4□□□□□ -0.42
CCDC38-202ENST00000546386 RNASEH2BQ5TBB1 312 aaKnown RBP12.4□□□□□ -0.42
CCDC38-202ENST00000546386 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 LIMS2Q7Z4I7 341 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 SPATA2LQ8IUW3 424 aaPredicted RBP12.4□□□□□ -0.42
CCDC38-202ENST00000546386 FAM126BQ8IXS8 530 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 BCAS4Q8TDM0 211 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 PXYLP1Q8TE99 480 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 RUBCNQ92622 972 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 EXOC4Q96A65 974 aa12.4□□□□□ -0.42
CCDC38-202ENST00000546386 CFAP36Q96G28 342 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms