RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GPR88Q9GZN0 384 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PLEKHA4Q9H4M7 779 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SFXN1Q9H9B4 322 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 CYP4F12Q9HCS2 524 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 TMLHEQ9NVH6 421 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 CLDND1Q9NY35 253 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 CEP72Q9P209 647 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 DPP7Q9UHL4 492 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 DNAJC12Q9UKB3 198 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 GTF3C4Q9UKN8 822 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PCDHB5Q9Y5E4 795 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 INSL5Q9Y5Q6 135 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 HELZP42694 1942 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ANAPC1Q9H1A4 1944 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 NUP210Q8TEM1 1887 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-211ENST00000546304 TRIOO75962 3097 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 BDP1A6H8Y1 2624 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 NCK2O43639 380 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 PAEPP09466 180 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 SPATA31D3P0C874 917 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 FAM200BP0CF97 657 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CD19P15391 556 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 PTPN1P18031 435 aaKnown RBP6.7□□□□□ -1.34
PRKDC-211ENST00000546304 GNA15P30679 374 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 HOXA9P31269 272 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 ELF1P32519 619 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 USP8P40818 1118 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CDR1P51861 262 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 JAM2P57087 298 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 DUSP4Q13115 394 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 PLD1Q13393 1074 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 LRP8Q14114 963 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 DRAP1Q14919 205 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CCDC85BQ15834 202 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-211ENST00000546304 GOLGA7BQ2TAP0 167 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 MGAT5BQ3V5L5 792 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 SGO2Q562F6 1265 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 FIGNQ5HY92 759 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 FAM171BQ6P995 826 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 LILRA6Q6PI73 481 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 SPATA31D4Q6ZUB0 917 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CCDC149Q6ZUS6 474 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CACNA2D4Q7Z3S7 1137 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 TCEAL8Q8IYN2 117 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 FUKQ8N0W3 1084 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CRYBG2Q8N1P7 616 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 C12orf29Q8N999 325 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 SLC2A14Q8TDB8 520 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 SMARCD1Q96GM5 515 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 TMEM176AQ96HP8 235 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 FAM83CQ9BQN1 747 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 STK33Q9BYT3 514 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 TRIM5Q9C035 493 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF518BQ9C0D4 1074 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 TTYH3Q9C0H2 523 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 C7orf69Q9H7B7 122 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 ZFYVE1Q9HBF4 777 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CYP4F11Q9HBI6 524 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 DMAP1Q9NPF5 467 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-211ENST00000546304 NLRC4Q9NPP4 1024 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 HSFX1Q9UBD0 423 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 MAFFQ9ULX9 164 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CNTN6Q9UQ52 1028 aa6.7□□□□□ -1.34
PRKDC-211ENST00000546304 CUL9Q8IWT3 2517 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 SCO2A0A1W2PP80 73 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 F8VP50 259 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 M0QYV0 167 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 O00370 1275 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 CLDN5O00501 218 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 CYP26A1O43174 497 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 AP5Z1O43299 807 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 RFPL2O75678 378 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 SOAT2O75908 522 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 SEC24AO95486 1093 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 LRG1P02750 347 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 GYPCP04921 128 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 POU2F2P09086 479 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 HOXB8P17481 243 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-211ENST00000546304 ATF6P18850 670 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 KCNA5P22460 613 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 BDNFP23560 247 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 CYP2F1P24903 491 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 ADORA2BP29275 332 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 SOX5P35711 763 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 MAGEA11P43364 429 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 PDE6CP51160 858 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF75DP51815 510 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 CACNA2D1P54289 1103 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 BCAT1P54687 386 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 DLX2Q07687 328 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-211ENST00000546304 TWF1Q12792 350 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 ADAM15Q13444 863 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 TRIM14Q14142 442 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 VEPH1Q14D04 833 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 POU4F3Q15319 338 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 STILQ15468 1287 aa6.69□□□□□ -1.34
PRKDC-211ENST00000546304 PPM1LQ5SGD2 360 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms