RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 MAP3K13O43283 966 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 RARGP13631 454 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 P4HA1P13674 534 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 ATP5C1P36542 298 aaKnown RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 MFAP3P55082 362 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 GEN1Q17RS7 908 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 PPP1R26Q5T8A7 1209 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 TPGS1Q6ZTW0 290 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 RAB44Q7Z6P3 723 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 METTL3Q86U44 580 aaKnown RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 CHPFQ8IZ52 775 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 MINDY1Q8N5J2 469 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 CEP76Q8TAP6 659 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 CYFIP2Q96F07 1278 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 PIWIL1Q96J94 861 aaKnown RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 MKRN2Q9H000 416 aaKnown RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 CYP3A43Q9HB55 503 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 CLIC5Q9NZA1 410 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 CLEC4EQ9ULY5 219 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 MSRB2Q9Y3D2 182 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 KCNJ18B7U540 433 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 ZNF217O75362 1048 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 RHOBTB3O94955 611 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 IGLV3-19P01714 112 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 CFIP05156 583 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 HOXB3P14651 431 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-221ENST00000546229 IL12RB1P42701 662 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 GCLMP48507 274 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 DGKGP49619 791 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 VAMP7P51809 220 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 COPAP53621 1224 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 BNC1Q01954 994 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 DPYDQ12882 1025 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 FUT11Q495W5 492 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 PGBD3Q8N328 593 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 TRIML1Q8N9V2 468 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 C1orf216Q8TAB5 229 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 SEMA4DQ92854 862 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 JAKMIP2Q96AA8 810 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 XPO6Q96QU8 1125 aaKnown RBP13.21□□□□□ -0.29
COPS7A-221ENST00000546229 NT5C1AQ9BXI3 368 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 PLK2Q9NYY3 685 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 THAP10Q9P2Z0 257 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-221ENST00000546229 DNMT3LQ9UJW3 386 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 ZDHHC9Q9Y397 364 aa13.21□□□□□ -0.29
COPS7A-221ENST00000546229 IGSF10Q6WRI0 2623 aa13.21□□□□□ -0.3
COPS7A-221ENST00000546229 PTPRBP23467 1997 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 A0A1B0GVL5 298 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 TAF4O00268 1085 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 CBFA2T3O75081 653 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 MYL1P05976 194 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 PDIA4P13667 645 aaKnown RBP13.2□□□□□ -0.3
COPS7A-221ENST00000546229 CMA1P23946 247 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 NR2F2P24468 414 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 PLA2G4AP47712 749 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 SIM1P81133 766 aaPredicted RBP13.2□□□□□ -0.3
COPS7A-221ENST00000546229 GFPT1Q06210 699 aaPredicted RBP13.2□□□□□ -0.3
COPS7A-221ENST00000546229 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 RABEPKQ7Z6M1 372 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 SLC4A11Q8NBS3 891 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 ZCCHC14Q8WYQ9 949 aaKnown RBP13.2□□□□□ -0.3
COPS7A-221ENST00000546229 BHMTQ93088 406 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 CAMK1GQ96NX5 476 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 ARID3AQ99856 593 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 NACA2Q9H009 215 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 WSB2Q9NYS7 404 aaPredicted RBP13.2□□□□□ -0.3
COPS7A-221ENST00000546229 LSM7Q9UK45 103 aaKnown RBP13.2□□□□□ -0.3
COPS7A-221ENST00000546229 NFE2L3Q9Y4A8 694 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 SLCO1B1Q9Y6L6 691 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 STON1Q9Y6Q2 735 aa13.2□□□□□ -0.3
COPS7A-221ENST00000546229 CD58P19256 250 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 PSEN1P49768 467 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 RAD23BP54727 409 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 GRIK2Q13002 908 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 C10orf120Q5SQS8 335 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 ARHGAP17Q68EM7 881 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 INTS8Q75QN2 995 aaKnown RBP13.19□□□□□ -0.3
COPS7A-221ENST00000546229 GUF1Q8N442 669 aaKnown RBP13.19□□□□□ -0.3
COPS7A-221ENST00000546229 BAHD1Q8TBE0 780 aaPredicted RBP13.19□□□□□ -0.3
COPS7A-221ENST00000546229 GTPBP2Q9BX10 602 aaKnown RBP13.19□□□□□ -0.3
COPS7A-221ENST00000546229 GOLPH3LQ9H4A5 285 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 SLC32A1Q9H598 525 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 TMEM8AQ9HCN3 771 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 NAGPAQ9UK23 515 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 AGO1Q9UL18 857 aaKnown RBP13.19□□□□□ -0.3
COPS7A-221ENST00000546229 NUMA1Q14980 2115 aa13.19□□□□□ -0.3
COPS7A-221ENST00000546229 TULP2O00295 520 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms