RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TAAR1Q96RJ0 339 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF184Q99676 751 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TSEN34Q9BSV6 310 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 NAT9Q9BTE0 207 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 CADM1Q9BY67 442 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MRPL4Q9BYD3 311 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF341Q9BYN7 854 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 APOBEC3GQ9HC16 384 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 XAB2Q9HCS7 855 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MLXIPLQ9NP71 852 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SLCO1B3Q9NPD5 702 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ACP6Q9NPH0 428 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MRGBPQ9NV56 204 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 DNAJC17Q9NVM6 304 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ZDHHC7Q9NXF8 308 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 HACD3Q9P035 362 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SIRPGQ9P1W8 387 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 CPSF2Q9P2I0 782 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 HEY2Q9UBP5 337 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 PGAP2Q9UHJ9 254 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TAGLN3Q9UI15 199 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 GGT7Q9UJ14 662 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TEX264Q9Y6I9 313 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 IGKV6D-21A0A0A0MT36 114 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 BCLAF3A2AJT9 711 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TCP10L2B9ZVM9 353 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 C19orf81C9J6K1 198 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PDLIM1O00151 329 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 VWA5AO00534 786 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 CST8O60676 142 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TM7SF2O76062 418 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 CBX6O95503 412 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 IFNB1P01574 187 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TNNC2P02585 160 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 HMGCRP04035 888 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 SERPINA6P08185 405 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 LINGO3P0C6S8 592 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 SETSIPP0DME0 302 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TGFB3P10600 412 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 MYCLP12524 364 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 MLNP12872 115 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 GM2AP17900 193 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 AOC1P19801 751 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TPSB2P20231 275 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ACAT1P24752 427 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ADRA1DP25100 572 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 CRHR1P34998 444 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 RPL22P35268 128 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PGM1P36871 562 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PAPOLAP51003 745 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 HK2P52789 917 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 NLRP11P59045 1033 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 EIF3EP60228 445 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ACTR3P61158 418 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ACTR2P61160 394 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 OTUD4Q01804 1114 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 POU5F1BQ06416 359 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF252P-AS1Q0IIN9 211 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TRPC3Q13507 836 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 HNRNPDQ14103 355 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TFDP1Q14186 410 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 DPYSL3Q14195 570 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 KCNJ11Q14654 390 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 NOMO1Q15155 1222 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 RCN1Q15293 331 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TPSAB1Q15661 275 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PDCD2Q16342 344 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 INSCQ1MX18 579 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.71□□□□□ -1.342e-19■□□□□ 10.3
SNHG1-225ENST00000545920 BOLA3Q53S33 107 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 DCAF15Q66K64 600 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 GPAT2Q6NUI2 795 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 SDCCAG8Q86SQ7 713 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 CRLF3Q8IUI8 442 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ZBTB8OSQ8IWT0 167 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 HACE1Q8IYU2 909 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 C4orf33Q8N1A6 199 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF280CQ8ND82 737 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PPP2R3CQ969Q6 453 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 CCDC74AQ96AQ1 378 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 MCRS1Q96EZ8 462 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ANKRD36BP1Q96IX9 119 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 INSM2Q96T92 566 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 CNPY3Q9BT09 278 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM121Q9BTD3 319 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PI4K2AQ9BTU6 479 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM120AQ9BXJ8 343 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 DNAI2Q9GZS0 605 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 KLC2Q9H0B6 622 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 EPB41L1Q9H4G0 881 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 C12orf49Q9H741 205 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ZFYVE28Q9HCC9 887 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 VCX3AQ9NNX9 186 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PAPOLBQ9NRJ5 636 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 CISHQ9NSE2 258 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 RNF146Q9NTX7 359 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 FBXO28Q9NVF7 368 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 NMRK1Q9NWW6 199 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 NKX1-2Q9UD57 310 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms