RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 LRRC39Q96DD0 335 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 ACAP3Q96P50 834 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 EBNA1BP2Q99848 306 aaKnown RBP15.82■□□□□ 0.12
CNN3-207ENST00000545882 SLC4A5Q9BY07 1137 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 CXCL16Q9H2A7 254 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 NRDE2Q9H7Z3 1164 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 PLA2G4CQ9UP65 541 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 B2RBV5 119 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 CAPN9O14815 690 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 MDM4O15151 490 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 GCATO75600 419 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 ENO1P06733 434 aaKnown RBP15.82■□□□□ 0.12
CNN3-207ENST00000545882 ARF4P18085 180 aaPredicted RBP15.82■□□□□ 0.12
CNN3-207ENST00000545882 CRHR1P34998 444 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 PGM1P36871 562 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 SLC6A3Q01959 620 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 CDK18Q07002 472 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 MUM1Q2TAK8 710 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 LGSNQ5TDP6 509 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 ATG16L1Q676U5 607 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 NUDCD3Q8IVD9 361 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 LMNTD2Q8IXW0 634 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 LINC01465Q8N7H1 131 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 GSDMBQ8TAX9 411 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 APBB2Q92870 758 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 TBCBQ99426 244 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 SYT15Q9BQS2 421 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 ZNF670Q9BS34 389 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 CCDC106Q9BWC9 280 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 NT5C1AQ9BXI3 368 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 PCMTD2Q9NV79 361 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 DPP3Q9NY33 737 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 STX18Q9P2W9 335 aaKnown RBP15.82■□□□□ 0.12
CNN3-207ENST00000545882 KIAA1257Q9ULG3 409 aa15.82■□□□□ 0.12
CNN3-207ENST00000545882 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.82■□□□□ 0.12
CNN3-207ENST00000545882 RALGAPA2Q2PPJ7 1873 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 PAPSS1O43252 624 aaPredicted RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 MAGEC1O60732 1142 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 KRT38O76015 456 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 STAU1O95793 577 aaKnown RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 GSRP00390 522 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 BPGMP07738 259 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 TPSB2P20231 275 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 CYP2F1P24903 491 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 L1CAMP32004 1257 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 PHKA2P46019 1235 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 SLC26A2P50443 739 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 IGBP1P78318 339 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 GBE1Q04446 702 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 THOC5Q13769 683 aaKnown RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 TPSAB1Q15661 275 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 CCDC6Q16204 474 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 MDH1BQ5I0G3 518 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 MROH9Q5TGP6 573 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 LRRC74BQ6ZQY2 392 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 TMEM110Q86TL2 294 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 SCUBE3Q8IX30 993 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 CCDC33Q8N5R6 958 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 RBM15BQ8NDT2 890 aaKnown RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 DTX3LQ8TDB6 740 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 SCG3Q8WXD2 468 aaKnown RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 MTBPQ96DY7 904 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 MRPL45Q9BRJ2 306 aaKnown RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 B3GNT5Q9BYG0 378 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 SLC24A3Q9HC58 644 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 PPARGC1AQ9UBK2 798 aaKnown RBP15.81■□□□□ 0.12
CNN3-207ENST00000545882 PCDHA11Q9Y5I1 949 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 CSADQ9Y600 493 aa15.81■□□□□ 0.12
CNN3-207ENST00000545882 DNAJC25-GNG10A0A024R161 153 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 H3BRJ5 948 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 KITP10721 976 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 INSRRP14616 1297 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 SDC4P31431 198 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 ATXN1P54253 815 aaKnown RBP15.8■□□□□ 0.12
CNN3-207ENST00000545882 AQP5P55064 265 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 RBP5P82980 135 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 POU5F1BQ06416 359 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 PPP6R3Q5H9R7 873 aaPredicted RBP15.8■□□□□ 0.12
CNN3-207ENST00000545882 GADL1Q6ZQY3 521 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 TMPRSS6Q8IU80 811 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 CDKL3Q8IVW4 592 aaPredicted RBP15.8■□□□□ 0.12
CNN3-207ENST00000545882 UNC5BQ8IZJ1 945 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 NDUFAF2Q8N183 169 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 STKLD1Q8NE28 680 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 SLC35F5Q8WV83 523 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 UCMAQ8WVF2 138 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 C11orf84Q9BUA3 381 aaPredicted RBP15.8■□□□□ 0.12
CNN3-207ENST00000545882 MIS12Q9H081 205 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 TXNRD2Q9NNW7 524 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.8■□□□□ 0.12
CNN3-207ENST00000545882 MTMR10Q9NXD2 777 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 MOCS1Q9NZB8 636 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 MARCOQ9UEW3 520 aaPredicted RBP15.8■□□□□ 0.12
CNN3-207ENST00000545882 ITGA11Q9UKX5 1188 aa15.8■□□□□ 0.12
CNN3-207ENST00000545882 HBS1LQ9Y450 684 aaKnown RBP15.8■□□□□ 0.12
CNN3-207ENST00000545882 NR2E3Q9Y5X4 410 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms