RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 HOXA13P31271 388 aaPredicted RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 MRPS9P82933 396 aaKnown RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 SATB1Q01826 763 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 USP39Q53GS9 565 aaKnown RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 TM4SF20Q53R12 229 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 FSTL4Q6MZW2 842 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 CEP85Q6P2H3 762 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 ZNF852Q6ZMS4 543 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 CXXC5Q7LFL8 322 aaKnown RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 FILIP1Q7Z7B0 1213 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 FAM228AQ86W67 206 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 LONP2Q86WA8 852 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 ECHDC2Q86YB7 292 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 TRMT2AQ8IZ69 625 aaKnown RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 RNF169Q8NCN4 708 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 HIPK4Q8NE63 616 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 SLC7A14Q8TBB6 771 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 TRAPPC12Q8WVT3 735 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 PHKBQ93100 1093 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 KIF1BPQ96EK5 621 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 MAGEB10Q96LZ2 347 aaPredicted RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 DNAJC7Q99615 494 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 SENP7Q9BQF6 1050 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 EDEM2Q9BV94 578 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 BTBD2Q9BX70 525 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 VN1R3Q9BXE9 311 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 AMNQ9BXJ7 453 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 MRPL9Q9BYD2 267 aaKnown RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 SMARCAD1Q9H4L7 1026 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 TCP11L1Q9NUJ3 509 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 SNTG2Q9NY99 539 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 MAP3K20Q9NYL2 800 aaKnown RBP4.38□□□□□ -1.71
LRP6-207ENST00000545658 DPP7Q9UHL4 492 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 FBXO10Q9UK96 956 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 KLK13Q9UKR3 277 aa4.38□□□□□ -1.71
LRP6-207ENST00000545658 GSTTP1A0A1W2PQM5 241 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 C4orf47A7E2U8 309 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 NPIPB8E9PQR5 432 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 K7ESF4 209 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 MATN2O00339 956 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 SUV39H1O43463 412 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 C1QL1O75973 258 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 GLUD1P00367 558 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 GALTP07902 379 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 ZFYP08048 801 aaPredicted RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 CSRP1P21291 193 aaKnown RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 MPLP40238 635 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 CXCL12P48061 93 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 SERINC3Q13530 473 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 PCOLCEQ15113 449 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 PLCB4Q15147 1175 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 STILQ15468 1287 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 LONRF2Q1L5Z9 754 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 DAB2IPQ5VWQ8 1189 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 MTHFD1LQ6UB35 978 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 Q6ZSN1 163 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 MTSS1LQ765P7 747 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 POLNQ7Z5Q5 900 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 NOSTRINQ8IVI9 506 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 FAM9BQ8IZU0 186 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 SAMD3Q8N6K7 520 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 KBTBD3Q8NAB2 608 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 OR14K1Q8NGZ2 314 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 ASB15Q8WXK1 588 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 SEPT1Q8WYJ6 367 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 FRAT1Q92837 279 aaPredicted RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 ERCC4Q92889 916 aaPredicted RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 EXTL1Q92935 676 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 LRIG1Q96JA1 1093 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 GBP4Q96PP9 640 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 SRPK1Q96SB4 655 aaKnown RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 KXD1Q9BQD3 176 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 NT5C3AQ9H0P0 336 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 CSRNP2Q9H175 543 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 HEBP1Q9NRV9 189 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 VPS45Q9NRW7 570 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 MRPL17Q9NRX2 175 aaKnown RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 KCNH7Q9NS40 1196 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 ZDHHC7Q9NXF8 308 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 STK39Q9UEW8 545 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 CDH7Q9ULB5 785 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 NDRG2Q9UN36 371 aaKnown RBP4.37□□□□□ -1.71
LRP6-207ENST00000545658 PCDHGA5Q9Y5G8 931 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 RAI2Q9Y5P3 530 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 ITPR1Q14643 2758 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 FRMPD4Q14CM0 1322 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 IGSF10Q6WRI0 2623 aa4.37□□□□□ -1.71
LRP6-207ENST00000545658 MYH7P12883 1935 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 GREB1Q4ZG55 1949 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 A0A0G2JNJ9 132 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 GCOM1H8Y6P7 765 aaPredicted RBP4.36□□□□□ -1.71
LRP6-207ENST00000545658 FOXP2O15409 715 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 TEX28O15482 410 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 DHX16O60231 1041 aaKnown RBP4.36□□□□□ -1.71
LRP6-207ENST00000545658 PAPSS2O95340 614 aaPredicted RBP4.36□□□□□ -1.71
LRP6-207ENST00000545658 URODP06132 367 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 POLR2MP0CAP2 368 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 KCNA2P16389 499 aa4.36□□□□□ -1.71
LRP6-207ENST00000545658 ZSCAN20P17040 1043 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms