RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 MAP3K13O43283 966 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 GADD45BO75293 160 aaPredicted RBP20.84■□□□□ 0.93
CHD4-213ENST00000545584 CAVIN2O95810 425 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 PAEPP09466 180 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 SETSIPP0DME0 302 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 HOXB2P14652 356 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 NTSR1P30989 418 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 CORO1AP31146 461 aaKnown RBP20.84■□□□□ 0.93
CHD4-213ENST00000545584 LIMK1P53667 647 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 PAK1Q13153 545 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 CHPFQ8IZ52 775 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 OLIG1Q8TAK6 271 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 UBA3Q8TBC4 463 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 BHMTQ93088 406 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 OLA1Q9NTK5 396 aaKnown RBP20.84■□□□□ 0.93
CHD4-213ENST00000545584 BCLAF3A2AJT9 711 aaKnown RBP20.83■□□□□ 0.93
CHD4-213ENST00000545584 TULP2O00295 520 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 O00370 1275 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 FGFR1OPO95684 399 aaKnown RBP20.83■□□□□ 0.93
CHD4-213ENST00000545584 KLKB1P03952 638 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 CYBBP04839 570 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 BMP6P22004 513 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 ADIGQ0VDE8 80 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 UBR7Q8N806 425 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 RNF139Q8WU17 664 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 SMOC1Q9H4F8 434 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 PLK2Q9NYY3 685 aa20.83■□□□□ 0.93
CHD4-213ENST00000545584 BCKDHBP21953 392 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 P2RY2P41231 377 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 WASP42768 502 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 DHPSP49366 369 aaPredicted RBP20.82■□□□□ 0.92
CHD4-213ENST00000545584 STX17P56962 302 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 STILQ15468 1287 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 EGFLAMQ63HQ2 1017 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 LCLAT1Q6UWP7 414 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 LPCAT2Q7L5N7 544 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 CYP2U1Q7Z449 544 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 DENND1CQ8IV53 801 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 ABCA7Q8IZY2 2146 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 RLN3Q8WXF3 142 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 KCTD13Q8WZ19 329 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 PLD4Q96BZ4 506 aa20.82■□□□□ 0.92
CHD4-213ENST00000545584 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.82■□□□□ 0.92
CHD4-213ENST00000545584 THADAQ6YHU6 1953 aa20.81■□□□□ 0.92
CHD4-213ENST00000545584 KCNH2Q12809 1159 aa20.81■□□□□ 0.92
CHD4-213ENST00000545584 STPG1Q5TH74 334 aa20.81■□□□□ 0.92
CHD4-213ENST00000545584 TOGARAM2Q6ZUX3 1019 aa20.81■□□□□ 0.92
CHD4-213ENST00000545584 TRIML1Q8N9V2 468 aa20.81■□□□□ 0.92
CHD4-213ENST00000545584 NDRG1Q92597 394 aaKnown RBP20.81■□□□□ 0.92
CHD4-213ENST00000545584 SRRTQ9BXP5 876 aaKnown RBP20.81■□□□□ 0.92
CHD4-213ENST00000545584 CNGB3Q9NQW8 809 aa20.81■□□□□ 0.92
CHD4-213ENST00000545584 AGO1Q9UL18 857 aaKnown RBP20.81■□□□□ 0.92
CHD4-213ENST00000545584 PRRT4C9JH25 899 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 PENKP01210 267 aaPredicted RBP20.8■□□□□ 0.92
CHD4-213ENST00000545584 AFPP02771 609 aaKnown RBP20.8■□□□□ 0.92
CHD4-213ENST00000545584 CISD3P0C7P0 127 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 LCP1P13796 627 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 HARS2P49590 506 aaKnown RBP20.8■□□□□ 0.92
CHD4-213ENST00000545584 E2F5Q15329 346 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 CNGA2Q16280 664 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 PPM1JQ5JR12 505 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 BSPRYQ5W0U4 402 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 RNF43Q68DV7 783 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 RRAGAQ7L523 313 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 FMNL3Q8IVF7 1028 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 TRIM59Q8IWR1 403 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 CPXM2Q8N436 756 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 EHBP1Q8NDI1 1231 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 LMO3Q8TAP4 145 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 RXFP3Q9NSD7 469 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 ABCC13Q9NSE7 274 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 FBXO10Q9UK96 956 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 HCN2Q9UL51 889 aa20.8■□□□□ 0.92
CHD4-213ENST00000545584 HBS1LQ9Y450 684 aaKnown RBP20.8■□□□□ 0.92
CHD4-213ENST00000545584 M0QYV0 167 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 GFRA2O00451 464 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 KHNYNO15037 678 aaKnown RBP20.79■□□□□ 0.92
CHD4-213ENST00000545584 KCNA4P22459 653 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 MARSP56192 900 aaKnown RBP20.79■□□□□ 0.92
CHD4-213ENST00000545584 UBE2HP62256 183 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 GCNT1Q02742 428 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 MAP7D1Q3KQU3 841 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 PKDCCQ504Y2 493 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 FYB2Q5VWT5 728 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 TCEAL6Q6IPX3 200 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 BHLHA9Q7RTU4 235 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 SCML4Q8N228 414 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 RBBP8NLQ8NC74 664 aaPredicted RBP20.79■□□□□ 0.92
CHD4-213ENST00000545584 IPO4Q8TEX9 1081 aaKnown RBP20.79■□□□□ 0.92
CHD4-213ENST00000545584 DDI1Q8WTU0 396 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 UCMAQ8WVF2 138 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 TFAP2BQ92481 460 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 EDEM1Q92611 657 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 PIGKQ92643 395 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 GOLGA1Q92805 767 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 KAT5Q92993 513 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 TCEAL3Q969E4 200 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 ACOX2Q99424 681 aa20.79■□□□□ 0.92
CHD4-213ENST00000545584 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.79■□□□□ 0.92
CHD4-213ENST00000545584 SLC27A6Q9Y2P4 619 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms