RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 GSCP56915 257 aaPredicted RBP12.41□□□□□ -0.42
LTBR-214ENST00000545445 TAF10Q12962 218 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
LTBR-214ENST00000545445 SNX30Q5VWJ9 437 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 PRR23CQ6ZRP0 262 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 TOGARAM2Q6ZUX3 1019 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 GPRIN1Q7Z2K8 1008 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 TMC8Q8IU68 726 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 LRRC8AQ8IWT6 810 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 ZNF276Q8N554 614 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 STKLD1Q8NE28 680 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 NELL2Q99435 816 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 LRRC3Q9BY71 257 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 ULBP1Q9BZM6 244 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 CEP295Q9C0D2 2601 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 TLR8Q9NR97 1041 aaKnown RBP12.41□□□□□ -0.42
LTBR-214ENST00000545445 ASNSD1Q9NWL6 643 aa12.41□□□□□ -0.42
LTBR-214ENST00000545445 DNMT3BQ9UBC3 853 aaKnown RBP12.41□□□□□ -0.42
LTBR-214ENST00000545445 MRPS17Q9Y2R5 130 aaKnown RBP12.41□□□□□ -0.42
LTBR-214ENST00000545445 PAPSS1O43252 624 aaPredicted RBP12.4□□□□□ -0.42
LTBR-214ENST00000545445 ECI2O75521 394 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 GABBR2O75899 941 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 LCA5LO95447 670 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 F11P03951 625 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 USP17L7P0C7H9 530 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 ZDHHC11BP0C7U3 371 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 DDX6P26196 483 aaKnown RBP eCLIP12.4□□□□□ -0.42
LTBR-214ENST00000545445 GABRR2P28476 465 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 TUBP50607 506 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 DAOAP59103 153 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 USP46P62068 366 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 SRSF5Q13243 272 aaKnown RBP12.4□□□□□ -0.42
LTBR-214ENST00000545445 SPA17Q15506 151 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 ARHGAP15Q53QZ3 475 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 EFHC1Q5JVL4 640 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 CCDC122Q5T0U0 273 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 MMS22LQ6ZRQ5 1243 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 MON1BQ7L1V2 547 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 BEND5Q7L4P6 421 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 TADA2BQ86TJ2 420 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 MCOLN2Q8IZK6 566 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 ZNF687Q8N1G0 1237 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 CELF5Q8N6W0 485 aaKnown RBP12.4□□□□□ -0.42
LTBR-214ENST00000545445 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
LTBR-214ENST00000545445 MCRS1Q96EZ8 462 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 PPP1R9BQ96SB3 815 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 CDK5RAP1Q96SZ6 601 aaKnown RBP12.4□□□□□ -0.42
LTBR-214ENST00000545445 CHRDQ9H2X0 955 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 IL21Q9HBE4 155 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 CLIC5Q9NZA1 410 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 INTUQ9ULD6 942 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 NENFQ9UMX5 172 aa12.4□□□□□ -0.42
LTBR-214ENST00000545445 EPN1Q9Y6I3 576 aaPredicted RBP12.4□□□□□ -0.42
LTBR-214ENST00000545445 ANKRD62A6NC57 917 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 TMCO5BA8MYB1 307 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 ARHGAP6O43182 974 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 LRP3O75074 770 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 NDUFA10O95299 355 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 ERBB2P04626 1255 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 H2AFZP0C0S5 128 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 RALAP11233 206 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 MYL4P12829 197 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 HOXB3P14651 431 aaPredicted RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 PMLP29590 882 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 NRLP54845 237 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 SLC6A3Q01959 620 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 GFPT1Q06210 699 aaPredicted RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 PTP4A2Q12974 167 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 GRM2Q14416 872 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 CSRP2Q16527 193 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 SLC5A9Q2M3M2 681 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 PRSS36Q5K4E3 855 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 N4BP2L1Q5TBK1 243 aaPredicted RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 OR6B2Q6IFH4 312 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 POTEHQ6S545 545 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 OLFML1Q6UWY5 402 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 H2AFVQ71UI9 128 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 SLC26A9Q7LBE3 791 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 ARCQ7LC44 396 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 XYLT1Q86Y38 959 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 TMEM139Q8IV31 216 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 TXLNBQ8N3L3 684 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 C3orf20Q8ND61 904 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 C11orf70Q9BRQ4 267 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 ATXN3LQ9H3M9 355 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 ZNF334Q9HCZ1 680 aaPredicted RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 ABCC13Q9NSE7 274 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 TMEM51Q9NW97 253 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 TAS2R14Q9NYV8 317 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 GMIPQ9P107 970 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 MRPS23Q9Y3D9 190 aaKnown RBP12.39□□□□□ -0.43
LTBR-214ENST00000545445 FAM208BQ5VWN6 2430 aa12.39□□□□□ -0.43
LTBR-214ENST00000545445 DOCK6Q96HP0 2047 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms