RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 FIGNL1Q6PIW4 674 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 SASS6Q6UVJ0 657 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 RALGPS2Q86X27 583 aaPredicted RBP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 DDX42Q86XP3 938 aaKnown RBP eCLIP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 KIAA1958Q8N8K9 716 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ANKRD52Q8NB46 1076 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ZMIZ2Q8NF64 920 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 PRSS33Q8NF86 280 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 LMO3Q8TAP4 145 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 GPT2Q8TD30 523 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 SH3RF2Q8TEC5 729 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 EXOC4Q96A65 974 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 JAKMIP2Q96AA8 810 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ZFYVE19Q96K21 471 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 FAM81BQ96LP2 452 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 LRRC3BQ96PB8 259 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 SLC22A12Q96S37 553 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 FAM83CQ9BQN1 747 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 UBXN6Q9BZV1 441 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 NACA2Q9H009 215 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 THAP9Q9H5L6 903 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 DUS2Q9NX74 493 aaKnown RBP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 GTSE1Q9NYZ3 720 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 HESX1Q9UBX0 185 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 NDRG2Q9UN36 371 aaKnown RBP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ARHGAP26Q9UNA1 814 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 CCL26Q9Y258 94 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 PCDHB4Q9Y5E5 795 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 PATJQ8NI35 1801 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 COL4A2P08572 1712 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 SPECC1L-ADORA2AF8WAN1 911 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 H0Y858 1186 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 LEFTY2O00292 366 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 SLC9A3R1O14745 358 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 OLFM2O95897 454 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 OAS1P00973 400 aaKnown RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 PAEPP09466 180 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 MBL2P11226 248 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TARSP26639 723 aaKnown RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 RPS9P46781 194 aaKnown RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TUBP50607 506 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 KIF11P52732 1056 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 MFAP3P55082 362 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 NHLH1Q02575 133 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TNK2Q07912 1038 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TCF15Q12870 199 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 LRRC32Q14392 662 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 STILQ15468 1287 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF77Q15935 545 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 MAN2A1Q16706 1144 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TMEM270Q6UE05 265 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 GBP6Q6ZN66 633 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 RRAGAQ7L523 313 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 ENOSF1Q7L5Y1 443 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TADA2BQ86TJ2 420 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 C1orf210Q8IVY1 113 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 CPA6Q8N4T0 437 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TTC8Q8TAM2 541 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 OSCP1Q8WVF1 389 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 ATOH1Q92858 354 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 ATP2A3Q93084 1043 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 CLDN23Q96B33 292 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 MED15Q96RN5 788 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 IER2Q9BTL4 223 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 RNF38Q9H0F5 515 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 INTS2Q9H0H0 1204 aaKnown RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 EBF3Q9H4W6 596 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 UBE2TQ9NPD8 197 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 GMIPQ9P107 970 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 DLGAP2Q9P1A6 1054 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TSPAN16Q9UKR8 245 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 SCML2Q9UQR0 700 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 MTF2Q9Y483 593 aaPredicted RBP7.76□□□□□ -1.17
CPSF7-224ENST00000544990 CPQQ9Y646 472 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 MUC6Q6W4X9 2439 aa7.76□□□□□ -1.17
CPSF7-224ENST00000544990 TRIOO75962 3097 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 GTPBP10A4D1E9 387 aaKnown RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 HHLA1C9JL84 531 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 XPO1O14980 1071 aaKnown RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 COCHO43405 550 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 LAMTOR5O43504 91 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 TLR5O60602 858 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 NFATC1O95644 943 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 TPM2P07951 284 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ZDHHC11BP0C7U3 371 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 RALAP11233 206 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF16P17020 682 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ATP5C1P36542 298 aaKnown RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 MAPK8P45983 427 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 SOX9P48436 509 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 BCAT1P54687 386 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 GOLGA8FQ08AF8 430 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 GOLGA8DPQ0D2H9 430 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 BST2Q10589 180 aaKnown RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ANGPT1Q15389 498 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 CNGA2Q16280 664 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 EXOC3L4Q17RC7 722 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 GOLGA7BQ2TAP0 167 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 DGKKQ5KSL6 1271 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 CCDC183Q5T5S1 534 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms