RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 HLA-DPA1P20036 260 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 GP5P40197 560 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PRKCIP41743 596 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PCYT1AP49585 367 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 CHRNB3Q05901 458 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 ARPINQ7Z6K5 226 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 FBXO36Q8NEA4 188 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 REPS2Q8NFH8 660 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 STARD8Q92502 1023 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 ABHD8Q96I13 439 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 WNK4Q96J92 1243 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PHACTR1Q9C0D0 580 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 CTNNAL1Q9UBT7 734 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 ANKRD6Q9Y2G4 727 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 MROH7Q68CQ1 1323 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 SRRM3A6NNA2 597 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 TRDMT1O14717 391 aaKnown RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 MSCO60682 206 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 VPS4BO75351 444 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 SUPT7LO94864 414 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 KRT6AP02538 564 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 KRT6BP04259 564 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 CRABP2P29373 138 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 KRT6CP48668 564 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 TUFMP49411 452 aaKnown RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 NCALDP61601 193 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 ACTN3Q08043 901 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PRKAA1Q13131 559 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 KHDRBS2Q5VWX1 349 aaKnown RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 AGR3Q8TD06 166 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 KCNV2Q8TDN2 545 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 VPS33AQ96AX1 596 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 ADNPQ9H2P0 1102 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 CHST12Q9NRB3 414 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 RAD18Q9NS91 495 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 RNF112Q9ULX5 631 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 COL1A1P02452 1464 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 C10orf71Q711Q0 1435 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PIK3CDO00329 1044 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 BMP10O95393 424 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 GLP2RO95838 553 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PRIM2P49643 509 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 RAP1GDS1P52306 607 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 TMEM62Q0P6H9 643 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 CYLC2Q14093 348 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-207ENST00000544891 ERMARDQ5T6L9 678 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 MARC1Q5VT66 337 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 SCARA3Q6AZY7 606 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 OTOP1Q7RTM1 612 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PGBD3Q8N328 593 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 HES6Q96HZ4 224 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 C17orf80Q9BSJ5 609 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 ARHGAP20Q9P2F6 1191 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 SPASTQ9UBP0 616 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 TMCO1Q9UM00 188 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 PHTF1Q9UMS5 762 aa9.27□□□□□ -0.93
NECAP1-207ENST00000544891 GAKO14976 1311 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 ATMINO43313 823 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 CYP1A1P04798 512 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 GHRP10912 638 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 MBL2P11226 248 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 TRPC1P48995 793 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 CASP4P49662 377 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 RAD23AP54725 363 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 CORO7P57737 925 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 YWHAZP63104 245 aaKnown RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 ZNF571Q7Z3V5 609 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 ADCK1Q86TW2 530 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 SLC9A9Q8IVB4 645 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 NUP93Q8N1F7 819 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 ACTL9Q8TC94 416 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 ZNF606Q8WXB4 792 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 TUBGCP3Q96CW5 907 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 FUT8Q9BYC5 575 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 DCLRE1BQ9H816 532 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 DYRK1BQ9Y463 629 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 PCDHA3Q9Y5H8 950 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 TMEM114B3SHH9 223 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 CKMP06732 381 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 CPA3P15088 417 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 PPP3CCP48454 512 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 RTP1P59025 263 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 LRRC74AQ0VAA2 488 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 MSLNQ13421 630 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 CAMK2GQ13555 558 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 TRMT5Q32P41 509 aaKnown RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 SPANXN3Q5MJ09 141 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 GJC2Q5T442 439 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 GRTP1Q5TC63 336 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 ZNF544Q6NX49 715 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 KDELC2Q7Z4H8 507 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 DDX42Q86XP3 938 aaKnown RBP eCLIP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 KRT78Q8N1N4 520 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 MYCBPAPQ8TBZ2 947 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 SLC35C1Q96A29 364 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 SMARCD1Q96GM5 515 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 CNDP1Q96KN2 507 aa9.26□□□□□ -0.93
NECAP1-207ENST00000544891 MARCOQ9UEW3 520 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-207ENST00000544891 DTNAQ9Y4J8 743 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms