RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	EXOC3	O60645	756 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	JTB	O76095	146 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	ITGA2B	P08514	1039 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	APEH	P13798	732 aa	Known RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	GRK6	P43250	576 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	GSTM5	P46439	218 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	RENBP	P51606	427 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	NANOS3	P60323	173 aa	Known RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	GPC5	P78333	572 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	TXNL4A	P83876	142 aa	Known RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	HOXA4	Q00056	320 aa	Predicted RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	CSHL1	Q14406	222 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	KRTAP15-1	Q3LI76	137 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	ANO1	Q5XXA6	986 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	TANGO2	Q6ICL3	276 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	CCDC144NL	Q6NUI1	221 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	TRIM72	Q6ZMU5	477 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	ARHGEF25	Q86VW2	580 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	TTC30A	Q86WT1	665 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	NRSN1	Q8IZ57	195 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	RSC1A1	Q92681	617 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	EDC3	Q96F86	508 aa	Known RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	LTV1	Q96GA3	475 aa	Predicted RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	PRR11	Q96HE9	360 aa	Predicted RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	PAAF1	Q9BRP4	392 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	PPCS	Q9HAB8	311 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	ASIC5	Q9NY37	505 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	SH3BP4	Q9P0V3	963 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	ZNHIT2	Q9UHR6	403 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	HERC5	Q9UII4	1024 aa	Known RBP	4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	WNT6	Q9Y6F9	365 aa		4.89	□□□□□ -1.63
RAP1B-231	ENST00000544639	CTIF	O43310	598 aa	Known RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	PRAMEF2	O60811	474 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	RPP40	O75818	363 aa	Known RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	MBP	P02686	304 aa	Predicted RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	AKT1	P31749	480 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	HAL	P42357	657 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	SEMA3B	Q13214	749 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	BFSP2	Q13515	415 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	DHX8	Q14562	1220 aa	Known RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	P3H1	Q32P28	736 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	TRIM60	Q495X7	471 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	STRIP1	Q5VSL9	837 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	RINT1	Q6NUQ1	792 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	C12orf76	Q8N812	135 aa	Predicted RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	TRAPPC12	Q8WVT3	735 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	DAZAP1	Q96EP5	407 aa	Known RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	KAZALD1	Q96I82	304 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	HERPUD2	Q9BSE4	406 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	CINP	Q9BW66	212 aa	Predicted RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	TMEM120A	Q9BXJ8	343 aa		4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	GAR1	Q9NY12	217 aa	Known RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.88	□□□□□ -1.63
RAP1B-231	ENST00000544639	COL11A2	P13942	1736 aa	Predicted RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM90A18P	A6NE21	464 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM90A16P	A6NEW6	464 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM90A9P	A6NNJ1	464 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM90A5P	A8MXJ8	464 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639		M0QZQ0	153 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	PIP5K1C	O60331	668 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	PPFIA2	O75334	1257 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	PROP1	O75360	226 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	ACTL6B	O94805	426 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	CER1	O95813	267 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	NUDT3	O95989	172 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	MT-CO3	P00414	261 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	IGLV2-14	P01704	120 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM90A15P	P0C7V4	464 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM90A14P	P0C7W9	464 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	GYS1	P13807	737 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	ZNF37A	P17032	561 aa	Predicted RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	BMP5	P22003	454 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	COPB1	P53618	953 aa	Known RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	PNLIPRP1	P54315	467 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	POLE2	P56282	527 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	RAE1	P78406	368 aa	Known RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	CFHR3	Q02985	330 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	CCDC15	Q0P6D6	951 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	SULT6B1	Q6IMI4	303 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	TRABD2A	Q86V40	505 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	DNAJC10	Q8IXB1	793 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	EXOC8	Q8IYI6	725 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	BOLL	Q8N9W6	283 aa	Known RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	MAFA	Q8NHW3	353 aa	Predicted RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	SLC22A17	Q8WUG5	538 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	WDR60	Q8WVS4	1066 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	CCT6B	Q92526	530 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	EIF3C	Q99613	913 aa	Known RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	RTKN	Q9BST9	563 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	SORBS1	Q9BX66	1292 aa	Known RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	MYLK2	Q9H1R3	596 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	R3HDML	Q9H3Y0	253 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	RIOX1	Q9H6W3	641 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	USP29	Q9HBJ7	922 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	KCNK9	Q9NPC2	374 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	PRDM8	Q9NQV8	689 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	TFCP2L1	Q9NZI6	479 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	FZD4	Q9ULV1	537 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms