RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MAPRE1Q15691 268 aaKnown RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CNGA2Q16280 664 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 ITPRIPL2Q3MIP1 535 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 SLC39A12Q504Y0 691 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 TMEM196Q5HYL7 178 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 DESI1Q6ICB0 168 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 PKN3Q6P5Z2 889 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CEP68Q76N32 757 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 ARHGEF19Q8IW93 802 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 C2orf15Q8WU43 125 aaKnown RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 GAB3Q8WWW8 586 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CHFRQ96EP1 664 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 TRIM11Q96F44 468 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 LOXL4Q96JB6 756 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CEP295NLQ96MC4 621 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 SEPT5Q99719 369 aaPredicted RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 FAM83CQ9BQN1 747 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 NT5C1AQ9BXI3 368 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 ISCUQ9H1K1 167 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 DEF6Q9H4E7 631 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 RABGEF1Q9UJ41 708 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 ZMYM5Q9UJ78 669 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 NAGPAQ9UK23 515 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 NOCTQ9UK39 431 aaKnown RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CEP83Q9Y592 693 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 SCN1AP35498 2009 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 LAMA1P25391 3075 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 TM4SF5O14894 197 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 RTN2O75298 545 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 RPP40O75818 363 aaKnown RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 EPN2O95208 641 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 CYP1A1P04798 512 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 ZNF806P0C7X5 589 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 SETSIPP0DME0 302 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 VDRP11473 427 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 DDX6P26196 483 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 PCSK1P29120 753 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 PMLP29590 882 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 RAP1GAPP47736 663 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 VAV2P52735 878 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 GSCP56915 257 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 LRMPQ12912 555 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 RUNX3Q13761 415 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 VEPH1Q14D04 833 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 SF3A2Q15428 464 aaKnown RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 IFI16Q16666 785 aaKnown RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 MGAT5BQ3V5L5 792 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 TDRD12Q587J7 1177 aaKnown RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 PLA2G2CQ5R387 149 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 E4F1Q66K89 784 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 LMBRD2Q68DH5 695 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 ARHGAP17Q68EM7 881 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 IL31Q6EBC2 164 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 FSTL4Q6MZW2 842 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 ALKBH5Q6P6C2 394 aaKnown RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 LYPD8Q6UX82 237 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 RAD9BQ6WBX8 426 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 ZNF571Q7Z3V5 609 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 TMEM150AQ86TG1 271 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 CMTM8Q8IZV2 173 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 CCAR2Q8N163 923 aaKnown RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 C12orf50Q8NA57 414 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 RBBP8NLQ8NC74 664 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 SPPL2BQ8TCT7 592 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 WNT2BQ93097 391 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 TMEM176AQ96HP8 235 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 GCNAQ96QF7 691 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 CHP1Q99653 195 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 AGPAT1Q99943 283 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 ACBD6Q9BR61 282 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 PI4K2AQ9BTU6 479 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 SLC46A2Q9BY10 475 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 UBXN6Q9BZV1 441 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 SMG9Q9H0W8 520 aaKnown RBP6.92□□□□□ -1.3
CDCA3-209ENST00000544610 ARRDC1-AS1Q9H2J1 176 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 KIF9Q9HAQ2 790 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 HPS4Q9NQG7 708 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 RXFP3Q9NSD7 469 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 FKBPLQ9UIM3 349 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 VPS9D1Q9Y2B5 631 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 PPP2R2CQ9Y2T4 447 aa6.92□□□□□ -1.3
CDCA3-209ENST00000544610 ANKRD62A6NC57 917 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 OTOL1A6NHN0 477 aaPredicted RBP6.91□□□□□ -1.3
CDCA3-209ENST00000544610 SOWAHDA6NJG2 315 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 SOBPA7XYQ1 873 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 CYB561D2O14569 222 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 TRDMT1O14717 391 aaKnown RBP6.91□□□□□ -1.3
CDCA3-209ENST00000544610 AXIN1O15169 862 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 CYP26A1O43174 497 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 ATG13O75143 517 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 MTA2O94776 668 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 F11P03951 625 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 TMEM253P0C7T8 217 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 HAPLN1P10915 354 aaPredicted RBP6.91□□□□□ -1.3
CDCA3-209ENST00000544610 UNGP13051 313 aaPredicted RBP6.91□□□□□ -1.3
CDCA3-209ENST00000544610 HMGA1P17096 107 aaKnown RBP6.91□□□□□ -1.3
CDCA3-209ENST00000544610 TNFAIP3P21580 790 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 GNA15P30679 374 aa6.91□□□□□ -1.3
CDCA3-209ENST00000544610 SCNN1AP37088 669 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms