RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	ETFBKMT	Q8IXQ9	262 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	NAT16	Q8N8M0	369 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	KCNV2	Q8TDN2	545 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	EDEM1	Q92611	657 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	WBP2	Q969T9	261 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	LSM14B	Q9BX40	385 aa	Known RBP	13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	MIS12	Q9H081	205 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	EPC1	Q9H2F5	836 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	TAB2	Q9NYJ8	693 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	BECN2	A8MW95	431 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382		K7EQS6	105 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	CAPN9	O14815	690 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	CACNG3	O60359	315 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	APBB3	O95704	486 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	LATS1	O95835	1130 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	PTMS	P20962	102 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	CDK11B	P21127	795 aa	Known RBP	13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	ZNF445	P59923	1031 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	APBA1	Q02410	837 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	DMC1	Q14565	340 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	E2F5	Q15329	346 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	EOGT	Q5NDL2	527 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	CDKAL1	Q5VV42	579 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	MSANTD2	Q6P1R3	559 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	PKN3	Q6P5Z2	889 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	DENND1C	Q8IV53	801 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	TERB1	Q8NA31	727 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	USP33	Q8TEY7	942 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	RUBCN	Q92622	972 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	FAM149B1	Q96BN6	582 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	SLC4A5	Q9BY07	1137 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	PDCL3	Q9H2J4	239 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	SIX2	Q9NPC8	291 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	NCDN	Q9UBB6	729 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	SFMBT1	Q9UHJ3	866 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	AGO1	Q9UL18	857 aa	Known RBP	13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	PCDHGC3	Q9UN70	934 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	SMG5	Q9UPR3	1016 aa	Known RBP	13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	DAAM1	Q9Y4D1	1078 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382	SPAG17	Q6Q759	2223 aa		13.2	□□□□□ -0.3
CLPB-213	ENST00000544382		A0A0A0MRY4	1105 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	FOXN3	O00409	490 aa	Predicted RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	ALDH1A2	O94788	518 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	NCAM1	P13591	858 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	TIE1	P35590	1138 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	RPL34	P49207	117 aa	Known RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	DGKE	P52429	567 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	TYRO3	Q06418	890 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	PDCL	Q13371	301 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	SIM2	Q14190	667 aa	Predicted RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	DRAP1	Q14919	205 aa	Predicted RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	KRT31	Q15323	416 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	TRIP4	Q15650	581 aa	Predicted RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	C10orf76	Q5T2E6	689 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	KLHDC7A	Q5VTJ3	777 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	NUGGC	Q68CJ6	796 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	PRR23B	Q6ZRT6	265 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	CEP68	Q76N32	757 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	BEND5	Q7L4P6	421 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	UNC45B	Q8IWX7	931 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	SCUBE3	Q8IX30	993 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	FAM71A	Q8IYT1	594 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	CPXM2	Q8N436	756 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	TSTD1	Q8NFU3	115 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	IPO4	Q8TEX9	1081 aa	Known RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	EZH1	Q92800	747 aa	Predicted RBP	13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	SERPINB11	Q96P15	392 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	HHIP	Q96QV1	700 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	VPS16	Q9H269	839 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	LHX5	Q9H2C1	402 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	SYNC	Q9H7C4	482 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	PLCB1	Q9NQ66	1216 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	FANCL	Q9NW38	375 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	C2orf42	Q9NWW7	574 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	GMEB2	Q9UKD1	530 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382	MMP17	Q9ULZ9	603 aa		13.19	□□□□□ -0.3
CLPB-213	ENST00000544382		E5RJQ4	531 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	KLF8	O95600	359 aa	Predicted RBP	13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	KLKB1	P03952	638 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	UCHL3	P15374	230 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	SLC11A2	P49281	568 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	DGKG	P49619	791 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	DMWD	Q09019	674 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	NNT	Q13423	1086 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	SDE2	Q6IQ49	451 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	CAVIN1	Q6NZI2	390 aa	Known RBP	13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	TMEM110	Q86TL2	294 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	PASD1	Q8IV76	773 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	PHTF2	Q8N3S3	785 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	SUMF1	Q8NBK3	374 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	MSANTD4	Q8NCY6	345 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	CLEC4C	Q8WTT0	213 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	DDI1	Q8WTU0	396 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	BHMT	Q93088	406 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	PPP1R13B	Q96KQ4	1090 aa		13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	DDX50	Q9BQ39	737 aa	Known RBP	13.18	□□□□□ -0.3
CLPB-213	ENST00000544382	STK33	Q9BYT3	514 aa		13.18	□□□□□ -0.3

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