RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 NPY6RQ99463 290 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 LGMNQ99538 433 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 PABPC3Q9H361 631 aaKnown RBP14.22□□□□□ -0.13
HCFC2-202ENST00000544223 HOMER3Q9NSC5 361 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 WHRNQ9P202 907 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 KCNN4O15554 427 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 RIPK2O43353 540 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 LTFP02788 710 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 ITGAVP06756 1048 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 CTCFP49711 727 aaPredicted RBP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 SLC5A3P53794 718 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 BASP1P80723 227 aaKnown RBP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 MSS51Q4VC12 460 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 RAB41Q5JT25 222 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 RTP2Q5QGT7 225 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 BSPRYQ5W0U4 402 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 NKD2Q969F2 451 aaPredicted RBP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 OSER1Q9NX31 292 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 MARCH5Q9NX47 278 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 APOL1O14791 398 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 MCF2LO15068 1137 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 DAB1O75553 588 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 NOS2P35228 1153 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 SNX16P57768 344 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 TSPY1Q01534 308 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 MTMR3Q13615 1198 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 DENND2CQ68D51 928 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 HIBCHQ6NVY1 386 aaPredicted RBP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 HOMEZQ8IX15 550 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 THEM5Q8N1Q8 247 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 EIF1ADQ8N9N8 165 aaKnown RBP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 CCDC110Q8TBZ0 833 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 NMUR1Q9HB89 426 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 PIH1D1Q9NWS0 290 aaKnown RBP14.21□□□□□ -0.13
HCFC2-202ENST00000544223 ADAM28Q9UKQ2 775 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 FZD10Q9ULW2 581 aa14.21□□□□□ -0.13
HCFC2-202ENST00000544223 ADAM12O43184 909 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 IFI35P80217 286 aaPredicted RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 ROR1Q01973 937 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 FNBP1LQ5T0N5 605 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 CCDC13Q8IYE1 715 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 SEPT8Q92599 483 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 RUNDC3BQ96NL0 473 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 CSNK1G1Q9HCP0 422 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 WDR6Q9NNW5 1121 aaKnown RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 SAYSD1Q9NPB0 183 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 DMAP1Q9NPF5 467 aaPredicted RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 PRDM5Q9NQX1 630 aaPredicted RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 FEZ2Q9UHY8 353 aaPredicted RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 LCMT1Q9UIC8 334 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 NOVA2Q9UNW9 492 aaKnown RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 DNALI1O14645 258 aaPredicted RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 MDM4O15151 490 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 TMEM63AO94886 807 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 MYZAPP0CAP1 466 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 PRMT2P55345 433 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 NOMO1Q15155 1222 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 DPYSL2Q16555 572 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 CTXN3Q4LDR2 81 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 TAC4Q86UU9 113 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 MAP7D3Q8IWC1 876 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 DEPDC1BQ8WUY9 529 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 CPT1BQ92523 772 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 SLC2A13Q96QE2 648 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 TRIM56Q9BRZ2 755 aaKnown RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 FTHL17Q9BXU8 183 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 SIK2Q9H0K1 926 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 TMBIM4Q9HC24 238 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 TBK1Q9UHD2 729 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 XPO7Q9UIA9 1087 aaKnown RBP14.2□□□□□ -0.14
HCFC2-202ENST00000544223 PCDHB8Q9UN66 801 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 MYO7AQ13402 2215 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 CEP290O15078 2479 aa14.2□□□□□ -0.14
HCFC2-202ENST00000544223 MFSD11O43934 449 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 OPA1O60313 960 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 TBX18O95935 607 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 ACRP10323 421 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 RNASEH2BQ5TBB1 312 aaKnown RBP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 NCBP2-AS2Q69YL0 99 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 NT5C3BQ969T7 300 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 UROC1Q96N76 676 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 USP29Q9HBJ7 922 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 NINJ2Q9NZG7 142 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 TPX2Q9ULW0 747 aaKnown RBP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 DRG1Q9Y295 367 aaKnown RBP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 SHROOM3Q8TF72 1996 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 SRGAP2BP0DMP2 458 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 RARGP13631 454 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 RDXP35241 583 aaKnown RBP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 GUCY1A3Q02108 690 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 PDK2Q15119 407 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 SMAD1Q15797 465 aaKnown RBP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 SLC9A4Q6AI14 798 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 DRICH1Q6PGQ1 229 aaPredicted RBP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 KCNT2Q6UVM3 1135 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms