RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ENDOVQ8N8Q3 282 aaKnown RBP13.96□□□□□ -0.17
PPME1-208ENST00000543525 CFAP61Q8NHU2 1237 aa13.96□□□□□ -0.17
PPME1-208ENST00000543525 EBNA1BP2Q99848 306 aaKnown RBP13.96□□□□□ -0.17
PPME1-208ENST00000543525 DNAI2Q9GZS0 605 aa13.96□□□□□ -0.17
PPME1-208ENST00000543525 DHX35Q9H5Z1 703 aaKnown RBP13.96□□□□□ -0.17
PPME1-208ENST00000543525 ARL8BQ9NVJ2 186 aa13.96□□□□□ -0.17
PPME1-208ENST00000543525 SLC5A4Q9NY91 659 aa13.96□□□□□ -0.17
PPME1-208ENST00000543525 NKX1-2Q9UD57 310 aaPredicted RBP13.96□□□□□ -0.17
PPME1-208ENST00000543525 MCM3APO60318 1980 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 FAM159BA6NKW6 160 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.18
PPME1-208ENST00000543525 DDNO94850 711 aaPredicted RBP13.96□□□□□ -0.18
PPME1-208ENST00000543525 SERPINB3P29508 390 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 MAGEA3P43357 314 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 GRIK4Q16099 956 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 FAM91A1Q658Y4 838 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 ARCQ7LC44 396 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 OR6B3Q8NGW1 331 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 RAB3IL1Q8TBN0 382 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 GTF3C2Q8WUA4 911 aaPredicted RBP13.96□□□□□ -0.18
PPME1-208ENST00000543525 OPTNQ96CV9 577 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 OXNAD1Q96HP4 312 aaPredicted RBP13.96□□□□□ -0.18
PPME1-208ENST00000543525 SIGLEC10Q96LC7 697 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 ZNF570Q96NI8 536 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 QKIQ96PU8 341 aaKnown RBP eCLIP13.96□□□□□ -0.18
PPME1-208ENST00000543525 C16orf70Q9BSU1 422 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 PCDHA11Q9Y5I1 949 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 MAD1L1Q9Y6D9 718 aa13.96□□□□□ -0.18
PPME1-208ENST00000543525 PLXNA1Q9UIW2 1896 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 H3BRB1 525 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 RFPL1O75677 317 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 MYL2P10916 166 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 CCNA1P78396 465 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 CDK18Q07002 472 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 BST2Q10589 180 aaKnown RBP13.95□□□□□ -0.18
PPME1-208ENST00000543525 TAF11Q15544 211 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 ZNF792Q3KQV3 632 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 MAMDC4Q6UXC1 1216 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 KCNV2Q8TDN2 545 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 CENPIQ92674 756 aaPredicted RBP13.95□□□□□ -0.18
PPME1-208ENST00000543525 E2F7Q96AV8 911 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 SNX27Q96L92 541 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 C7orf26Q96N11 449 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 CADM1Q9BY67 442 aaKnown RBP13.95□□□□□ -0.18
PPME1-208ENST00000543525 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
PPME1-208ENST00000543525 TUT1Q9H6E5 874 aaKnown RBP13.95□□□□□ -0.18
PPME1-208ENST00000543525 PLAC1Q9HBJ0 212 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 SNTG2Q9NY99 539 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 KCNK4Q9NYG8 393 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 AP4E1Q9UPM8 1137 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 NUMBLQ9Y6R0 609 aa13.95□□□□□ -0.18
PPME1-208ENST00000543525 A8MXQ7 604 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 HACD1B0YJ81 288 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 FCHO1O14526 889 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 GYG2O15488 501 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 GABBR2O75899 941 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 LUC7L3O95232 432 aaKnown RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 METTL18O95568 372 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 TPBGLP0DKB5 382 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 CNTFP26441 200 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 FDFT1P37268 417 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 ACADSBP45954 432 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 BCAT1P54687 386 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 TMPRSS15P98073 1019 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 HEATR6Q6AI08 1181 aaKnown RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 CDHR3Q6ZTQ4 885 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 BZW1Q7L1Q6 419 aaKnown RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 NUDCD3Q8IVD9 361 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.18
PPME1-208ENST00000543525 ANKRD52Q8NB46 1076 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 ARMC2Q8NEN0 867 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 DEPDC1BQ8WUY9 529 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 CDCA5Q96FF9 252 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 KCTD15Q96SI1 283 aaPredicted RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 C11orf84Q9BUA3 381 aaPredicted RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 B3GNT5Q9BYG0 378 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 DCLRE1BQ9H816 532 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 PRDM16Q9HAZ2 1276 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 SMYD2Q9NRG4 433 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 DICER1Q9UPY3 1922 aaKnown RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 CCDC85CA6NKD9 419 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 PPEF2O14830 753 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 BIRC5O15392 142 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 GSC2O15499 205 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 CSH1P0DML2 217 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 CSH2P0DML3 217 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 CRHR1P34998 444 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 GBE1Q04446 702 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 SLC10A2Q12908 348 aaPredicted RBP13.94□□□□□ -0.18
PPME1-208ENST00000543525 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 BMPR2Q13873 1038 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 ZBTB6Q15916 424 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 TIFABQ6ZNK6 161 aa13.94□□□□□ -0.18
PPME1-208ENST00000543525 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms