RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 ANKRD54Q6NXT1 300 aa16.71■□□□□ 0.27
TRIM65-204ENST00000543309 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
TRIM65-204ENST00000543309 HS6ST3Q8IZP7 471 aa16.71■□□□□ 0.27
TRIM65-204ENST00000543309 FAM172AQ8WUF8 416 aa16.71■□□□□ 0.27
TRIM65-204ENST00000543309 SMG7Q92540 1137 aaKnown RBP16.71■□□□□ 0.27
TRIM65-204ENST00000543309 MRPS31Q92665 395 aaKnown RBP16.71■□□□□ 0.27
TRIM65-204ENST00000543309 CD101Q93033 1021 aa16.71■□□□□ 0.27
TRIM65-204ENST00000543309 SERPINB11Q96P15 392 aa16.71■□□□□ 0.27
TRIM65-204ENST00000543309 WDR24Q96S15 920 aa16.71■□□□□ 0.27
TRIM65-204ENST00000543309 DNMT3BQ9UBC3 853 aaKnown RBP16.71■□□□□ 0.27
TRIM65-204ENST00000543309 CCDC66A2RUB6 948 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 M0QYT0 321 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 ZNF197O14709 1029 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 IRAK2O43187 625 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 PSTPIP1O43586 416 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 OLFM2O95897 454 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 FTCDO95954 541 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 RHOP08100 348 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 RDXP35241 583 aaKnown RBP16.7■□□□□ 0.26
TRIM65-204ENST00000543309 ATP5C1P36542 298 aaKnown RBP16.7■□□□□ 0.26
TRIM65-204ENST00000543309 PLA2G5P39877 138 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 KPNA1P52294 538 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-204ENST00000543309 AIF1P55008 147 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 HDAC4P56524 1084 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 ITIH3Q06033 890 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 HADHQ16836 314 aaKnown RBP16.7■□□□□ 0.26
TRIM65-204ENST00000543309 C10orf120Q5SQS8 335 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 CC2D1AQ6P1N0 951 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-204ENST00000543309 PDZD4Q76G19 769 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-204ENST00000543309 SND1Q7KZF4 910 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRIM65-204ENST00000543309 TAC4Q86UU9 113 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 ARFGAP1Q8N6T3 406 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 HES6Q96HZ4 224 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 ADAM33Q9BZ11 813 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 GOLPH3Q9H4A6 298 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 FAM204AQ9H8W3 233 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 HCFC1R1Q9NWW0 138 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 DDIT4Q9NX09 232 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 DNMT3LQ9UJW3 386 aa16.7■□□□□ 0.26
TRIM65-204ENST00000543309 LINC01565O15544 149 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 KRT7P08729 469 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 MYL4P12829 197 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 TFE3P19532 575 aaPredicted RBP16.69■□□□□ 0.26
TRIM65-204ENST00000543309 CTNNA2P26232 953 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 CTNNA1P35221 906 aaKnown RBP16.69■□□□□ 0.26
TRIM65-204ENST00000543309 CXCR3P49682 368 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 PITX1P78337 314 aaPredicted RBP16.69■□□□□ 0.26
TRIM65-204ENST00000543309 SLC25A11Q02978 314 aaKnown RBP16.69■□□□□ 0.26
TRIM65-204ENST00000543309 DEUP1Q05D60 604 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 RING1Q06587 406 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 CDO1Q16878 200 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 ARHGAP15Q53QZ3 475 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 PRSS36Q5K4E3 855 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 SH3PXD2AQ5TCZ1 1133 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 GPR149Q86SP6 731 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 RHOT1Q8IXI2 618 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 UBL4BQ8N7F7 174 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 ATXN3LQ9H3M9 355 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 CCSER2Q9H7U1 834 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 PIDD1Q9HB75 910 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 WDR6Q9NNW5 1121 aaKnown RBP16.69■□□□□ 0.26
TRIM65-204ENST00000543309 MARCH2Q9P0N8 246 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 USP18Q9UMW8 372 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 USTQ9Y2C2 406 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 TLR6Q9Y2C9 796 aa16.69■□□□□ 0.26
TRIM65-204ENST00000543309 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRIM65-204ENST00000543309 HBS1LQ9Y450 684 aaKnown RBP16.69■□□□□ 0.26
TRIM65-204ENST00000543309 CTAGE9A4FU28 777 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 COCHO43405 550 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 PRPSAP2O60256 369 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 SLC2A3P11169 496 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 MIPP30301 263 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 EFEMP1Q12805 493 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 MTA1Q13330 715 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 TRIP4Q15650 581 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-204ENST00000543309 BRMS1LQ5PSV4 323 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 SYCE2Q6PIF2 218 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 TMC5Q6UXY8 1006 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 SYT10Q6XYQ8 523 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 GRASPQ7Z6J2 395 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-204ENST00000543309 PSTKQ8IV42 348 aaKnown RBP16.68■□□□□ 0.26
TRIM65-204ENST00000543309 C12orf76Q8N812 135 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-204ENST00000543309 SHKBP1Q8TBC3 707 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 TEKT4Q8WW24 435 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 NTAN1Q96AB6 310 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 PABPC5Q96DU9 382 aaKnown RBP16.68■□□□□ 0.26
TRIM65-204ENST00000543309 NAPGQ99747 312 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-204ENST00000543309 TLR10Q9BXR5 811 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 ADAM7Q9H2U9 754 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 PIGVQ9NUD9 493 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.68■□□□□ 0.264e-6■■■□□ 18.6
TRIM65-204ENST00000543309 CLEC1BQ9P126 229 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 CALCOCO1Q9P1Z2 691 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 DNAI1Q9UI46 699 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 PCDHA3Q9Y5H8 950 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 NOTCH4Q99466 2003 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 C2orf16Q68DN1 1984 aa16.68■□□□□ 0.26
TRIM65-204ENST00000543309 A0A1W2PRU2 124 aa16.67■□□□□ 0.26
TRIM65-204ENST00000543309 C2orf78A6NCI8 922 aa16.67■□□□□ 0.26
TRIM65-204ENST00000543309 MDM4O15151 490 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms