RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CSH2P0DML3 217 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 HGFP14210 728 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 IL11P20809 199 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 KCNA3P22001 575 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 IGFBP6P24592 240 aaPredicted RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 EPHA8P29322 1005 aaPredicted RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 OAS2P29728 719 aaKnown RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 NTSR1P30989 418 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 CSF2RBP32927 897 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 HARS2P49590 506 aaKnown RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF134P52741 427 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 RARSP54136 660 aaKnown RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 SNX16P57768 344 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ADAM17P78536 824 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 IFI35P80217 286 aaPredicted RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 MYO1EQ12965 1108 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 CAMK1Q14012 370 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 USP10Q14694 798 aaKnown RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 RASA2Q15283 850 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TBR1Q16650 682 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 PRICKLE4Q2TBC4 344 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 FAM214AQ32MH5 1076 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 PTCHD3Q3KNS1 767 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TAPT1Q6NXT6 567 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 INO80CQ6PI98 192 aaPredicted RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC22A25Q6T423 547 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 KLHL24Q6TFL4 600 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC30A10Q6XR72 485 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 SZRD1Q7Z422 152 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ADGRE4PQ86SQ3 457 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 SNX32Q86XE0 403 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 XYLT1Q86Y38 959 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TEX11Q8IYF3 940 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 CFAP52Q8N1V2 620 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 LRRC71Q8N4P6 559 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TTC39CQ8N584 583 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 SRBD1Q8N5C6 995 aaKnown RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 FAM71DQ8N9W8 422 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 FSIP1Q8NA03 581 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 LINS1Q8NG48 757 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ZFP28Q8NHY6 868 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 METTL6Q8TCB7 284 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TBC1D5Q92609 795 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 USP6NLQ92738 828 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TFAP2CQ92754 450 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 FAM120BQ96EK7 910 aaKnown RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 CALML4Q96GE6 196 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 FEM1CQ96JP0 617 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 HIST1H2AAQ96QV6 131 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TRIB1Q96RU8 372 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 MECRQ9BV79 373 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 PHF7Q9BWX1 381 aaPredicted RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TRIM5Q9C035 493 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 PLEKHA2Q9HB19 425 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 VEZTQ9HBM0 779 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 CEP72Q9P209 647 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ZHX1Q9UKY1 873 aaPredicted RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 GDAQ9Y2T3 454 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF711Q9Y462 761 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ADAMTSL3P82987 1691 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 MAGI3Q5TCQ9 1506 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TNIKQ9UKE5 1360 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 UBE2QL1A1L167 161 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC38A8A6NNN8 435 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 TNPO2O14787 897 aaKnown RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 HOXA3O43365 443 aaPredicted RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 GJB3O75712 270 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 CLTBP09497 229 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 UBL4AP11441 157 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 FCER1AP12319 257 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 HK1P19367 917 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 YY1P25490 414 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 RBL1P28749 1068 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 RGS2P41220 211 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 GCLCP48506 637 aaPredicted RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 PGDP52209 483 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 RPS3AP61247 264 aaKnown RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 SLFN5Q08AF3 891 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 DCTN2Q13561 401 aaKnown RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 TDGQ13569 410 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 P3H1Q32P28 736 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 TBRG1Q3YBR2 411 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 NRN1LQ496H8 165 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 NOMO2Q5JPE7 1267 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF569Q5MCW4 686 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 HECTD3Q5T447 861 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 RPUSD3Q6P087 351 aaKnown RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 MSANTD2Q6P1R3 559 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 TAF2Q6P1X5 1199 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 GET4Q7L5D6 327 aaPredicted RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 VSIG1Q86XK7 387 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 SYT8Q8NBV8 401 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 RNF169Q8NCN4 708 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 ETNPPLQ8TBG4 499 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 RABGGTAQ92696 567 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 MCRS1Q96EZ8 462 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 CNDP2Q96KP4 475 aaKnown RBP4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 WDR24Q96S15 920 aa4.3□□□□□ -1.72
SFSWAP-211ENST00000542813 STN1Q9H668 368 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms