RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 COG7P83436 770 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 RAP1GAP2Q684P5 730 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 PPIL6Q8IXY8 311 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 NDUFAF2Q8N183 169 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 POPDC2Q9HBU9 364 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 MORF4L1Q9UBU8 362 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 SLC39A10Q9ULF5 831 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 ADAMTS7Q9UKP4 1686 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 CDH16O75309 829 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 STAMBPO95630 424 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 MX2P20592 715 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 SOX11P35716 441 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 ASPAP45381 313 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 CAV1Q03135 178 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 TUSC3Q13454 348 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 CDH18Q13634 790 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 POM121L1PQ3SYA9 428 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 VCPIP1Q96JH7 1222 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 MAGEB5Q9BZ81 275 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 PRDM12Q9H4Q4 367 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 FGFR1OP2Q9NVK5 253 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 TRPM5Q9NZQ8 1165 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 GTF2IRD1Q9UHL9 959 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 KAT6AQ92794 2004 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 GMNCA6NCL1 334 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 CFLARO15519 480 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 VEGFBP49765 207 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 TTC27Q6P3X3 843 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 SLC24A5Q71RS6 500 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 LRRC8DQ7L1W4 858 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 PPARGC1AQ9UBK2 798 aaKnown RBP10.49□□□□□ -0.73
TOP3A-208ENST00000542570 IPO11Q9UI26 975 aaKnown RBP10.49□□□□□ -0.73
TOP3A-208ENST00000542570 F5P12259 2224 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 PAPSS1O43252 624 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 OR1E1P30953 314 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 CCR1P32246 355 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 IRAK1P51617 712 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 ZNF143P52747 638 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 TBX4P57082 545 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 SOX4Q06945 474 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 ITPRIPL1Q6GPH6 555 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 B3GNT9Q6UX72 402 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 XYLT1Q86Y38 959 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 NUDCD3Q8IVD9 361 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 LRRC57Q8N9N7 239 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 LMO3Q8TAP4 145 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 BORCS6Q96GS4 357 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 FBXL18Q96ME1 805 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 NEUROG2Q9H2A3 272 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 MARCH2Q9P0N8 246 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 COQ4Q9Y3A0 265 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 ANKRD36CQ5JPF3 1778 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 YJEFN3A6XGL0 299 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 E7ENQ6 273 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 F8W810 466 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 CAPN15O75808 1086 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 STIP1P31948 543 aaKnown RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 RAB27AP51159 221 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 BIRC2Q13490 618 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 PHF13Q86YI8 300 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 PTPRN2Q92932 1015 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 WNT8BQ93098 351 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 SNX27Q96L92 541 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 CIPCQ9C0C6 399 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 SHOC2Q9UQ13 582 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 RNF103O00237 685 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 SOCS7O14512 581 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 DDX3YO15523 660 aaKnown RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 SH3BP5O60239 455 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 USP10Q14694 798 aaKnown RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 CA9Q16790 459 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 RAB6CQ53S08 254 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 SYPL2Q5VXT5 272 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 HIBCHQ6NVY1 386 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 MON1BQ7L1V2 547 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 NLRP14Q86W24 1093 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 RAB6CQ9H0N0 254 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 HAUS2Q9NVX0 235 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 KANSL3Q9P2N6 904 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 STXBP5LQ9Y2K9 1186 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 RP1L1Q8IWN7 2480 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 PTPRZ1P23471 2315 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 DIAPH2O60879 1101 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 PPFIA2O75334 1257 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 F7P08709 466 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 ERCC2P18074 760 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 TGM2P21980 687 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 TKTP29401 623 aaKnown RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 MDH1P40925 334 aaKnown RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 TCEA2Q15560 299 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 LGI2Q8N0V4 545 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 ARMC2Q8NEN0 867 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 PAWRQ96IZ0 340 aaKnown RBP10.48□□□□□ -0.73
TOP3A-208ENST00000542570 VPS39Q96JC1 886 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 KLHL5Q96PQ7 755 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 FAM111AQ96PZ2 611 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 NDFIP2Q9NV92 336 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 GTSE1Q9NYZ3 720 aa10.48□□□□□ -0.73
TOP3A-208ENST00000542570 VPS28Q9UK41 221 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms