RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 USP3Q9Y6I4 520 aa12.01□□□□□ -0.49
TMEM258-205ENST00000540434 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
TMEM258-205ENST00000540434 PI4KAP42356 2102 aa12.01□□□□□ -0.49
TMEM258-205ENST00000540434 A0A1W2PQH9 124 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 FAM170AA1A519 330 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 LRRC10BA6NIK2 292 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 MDM4O15151 490 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 COCHO43405 550 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 FGF19O95750 216 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 CAVIN2O95810 425 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 OLFM2O95897 454 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 PAEPP09466 180 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 KRT5P13647 590 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 HDCP19113 662 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 CSRP1P21291 193 aaKnown RBP12□□□□□ -0.49
TMEM258-205ENST00000540434 RGS7P49802 495 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 PON2Q15165 354 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 CNGA2Q16280 664 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 ARHGAP15Q53QZ3 475 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 RAB41Q5JT25 222 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 SNX30Q5VWJ9 437 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 NAIF1Q69YI7 327 aaPredicted RBP12□□□□□ -0.49
TMEM258-205ENST00000540434 PMF1Q6P1K2 205 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 LCLAT1Q6UWP7 414 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 RALGPS2Q86X27 583 aaPredicted RBP12□□□□□ -0.49
TMEM258-205ENST00000540434 SYNPOQ8N3V7 929 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 TTC39CQ8N584 583 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 WDTC1Q8N5D0 677 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 CSGALNACT1Q8TDX6 532 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 SLC35F5Q8WV83 523 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 ZNF606Q8WXB4 792 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 NAP1L5Q96NT1 182 aaPredicted RBP12□□□□□ -0.49
TMEM258-205ENST00000540434 BPIFA3Q9BQP9 254 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 GANQ9H2C0 597 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 FAM124BQ9H5Z6 455 aaPredicted RBP12□□□□□ -0.49
TMEM258-205ENST00000540434 CBX8Q9HC52 389 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 HPS4Q9NQG7 708 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 TDP1Q9NUW8 608 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 SMPD4Q9NXE4 827 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 GTSE1Q9NYZ3 720 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 UXTQ9UBK9 157 aaPredicted RBP12□□□□□ -0.49
TMEM258-205ENST00000540434 TJP2Q9UDY2 1190 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 WDR3Q9UNX4 943 aaKnown RBP eCLIP12□□□□□ -0.49
TMEM258-205ENST00000540434 ATP8B3O60423 1300 aa12□□□□□ -0.49
TMEM258-205ENST00000540434 CACNA1EQ15878 2313 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 PES1O00541 588 aaKnown RBP11.99□□□□□ -0.49
TMEM258-205ENST00000540434 RTN3O95197 1032 aaPredicted RBP11.99□□□□□ -0.49
TMEM258-205ENST00000540434 LETM1O95202 739 aaPredicted RBP11.99□□□□□ -0.49
TMEM258-205ENST00000540434 USP17L7P0C7H9 530 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 ARSAP15289 507 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 ZNF165P49910 485 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 KPNA1P52294 538 aaPredicted RBP11.99□□□□□ -0.49
TMEM258-205ENST00000540434 SCAPQ12770 1279 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 ZNF77Q15935 545 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 LUZP1Q86V48 1076 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 TTC16Q8NEE8 873 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 CLEC4CQ8WTT0 213 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 GCNAQ96QF7 691 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 FAM83CQ9BQN1 747 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 ULBP1Q9BZM6 244 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 TMEM9BQ9NQ34 198 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 SCML2Q9UQR0 700 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 INVSQ9Y283 1065 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 MYOFQ9NZM1 2061 aa11.99□□□□□ -0.49
TMEM258-205ENST00000540434 KIAA1549LQ6ZVL6 1849 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 TRAV19A0A0A6YYK7 116 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 BCLAF3A2AJT9 711 aaKnown RBP11.98□□□□□ -0.49
TMEM258-205ENST00000540434 ANTXRLA6NF34 631 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 GREM1O60565 184 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 C1QL1O75973 258 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 CKMP06732 381 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 UCHL3P15374 230 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 DDX6P26196 483 aaKnown RBP eCLIP11.98□□□□□ -0.495e-6■□□□□ 8.4
TMEM258-205ENST00000540434 AVPR1AP37288 418 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 USP8P40818 1118 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 GPD2P43304 727 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 TKTL1P51854 596 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 MFAP3P55082 362 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 YWHAEP62258 255 aaKnown RBP11.98□□□□□ -0.49
TMEM258-205ENST00000540434 FAM193AP78312 1265 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 SLC7A9P82251 487 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 DRAP1Q14919 205 aaPredicted RBP11.98□□□□□ -0.49
TMEM258-205ENST00000540434 SYCP1Q15431 976 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 SLC47A2Q86VL8 602 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 FAM71AQ8IYT1 594 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 BPIFB1Q8TDL5 484 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 SH3RF2Q8TEC5 729 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 E2F7Q96AV8 911 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 P2RY11Q96G91 374 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 SLITRK1Q96PX8 696 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 UBXN6Q9BZV1 441 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 PLCB1Q9NQ66 1216 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 COMMD8Q9NX08 183 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 KIAA1257Q9ULG3 409 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 CPQQ9Y646 472 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 WNT6Q9Y6F9 365 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 UNC79Q9P2D8 2635 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 ASXL3Q9C0F0 2248 aa11.98□□□□□ -0.49
TMEM258-205ENST00000540434 LGALS16A8MUM7 142 aa11.97□□□□□ -0.49
TMEM258-205ENST00000540434 M0QYV0 167 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms