RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SQORQ9Y6N5 450 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 A8MU76 341 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PRR5-ARHGAP8B1AHC4 643 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 E5RJQ4 531 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 SPOPO43791 374 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PEX10O60683 326 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PRKACBP22694 351 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ADCY7P51828 1080 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PEX3P56589 373 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ADAM17P78536 824 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ARHGAP8P85298 464 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CDKL1Q00532 357 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CTBSQ01459 385 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 HSF5Q4G112 596 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 RALGPS1Q5JS13 557 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PQLC1Q8N2U9 271 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CCDC106Q9BWC9 280 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PALMDQ9NP74 551 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 SSU72Q9NP77 194 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ACP6Q9NPH0 428 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 SF3B1O75533 1304 aaKnown RBP eCLIP9.79□□□□□ -0.849e-6■■■■■ 68.9
CTNNA1-243ENST00000540387 MEIS2O14770 477 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 RSL1D1O76021 490 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PARNO95453 639 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 STAT1P42224 750 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ACADSBP45954 432 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 BMXP51813 675 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 IFITM2Q01629 132 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 COASYQ13057 564 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ARHGEF6Q15052 776 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 TRIM16LQ309B1 348 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PPP1R18Q6NYC8 613 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 TTC23LQ6PF05 361 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CENPUQ71F23 418 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CADM3Q8N126 398 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 REXO1Q8N1G1 1221 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ELMOD1Q8N336 334 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 SUN5Q8TC36 379 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 GRIN3AQ8TCU5 1115 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ATG4AQ8WYN0 398 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 P2RX7Q99572 595 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 SLC2A11Q9BYW1 496 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 AASDHPPTQ9NRN7 309 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CHST7Q9NS84 486 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 HOXC10Q9NYD6 342 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 POLIQ9UNA4 740 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PHIPQ8WWQ0 1821 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 OTOFQ9HC10 1997 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ANKRD62A6NC57 917 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ALOX15BO15296 676 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CLDN3O15551 220 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ICAM1P05362 532 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 JAK1P23458 1154 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 RPA1P27694 616 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 HOXA7P31268 230 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 HNRNPFP52597 415 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 NDST2P52849 883 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 AP3M2P53677 418 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 MESDQ14696 234 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PGM2L1Q6PCE3 622 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CYP2U1Q7Z449 544 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 NOP9Q86U38 636 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 KBTBD6Q86V97 674 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CPNE8Q86YQ8 564 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PNMA5Q96PV4 448 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 SAYSD1Q9NPB0 183 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CNGB3Q9NQW8 809 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 VPS45Q9NRW7 570 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 KCNK4Q9NYG8 393 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 C6orf203Q9P0P8 240 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 STK17AQ9UEE5 414 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 MOSPD1Q9UJG1 213 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 ADAMTS5Q9UNA0 930 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 POMPQ9Y244 141 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 CORINQ9Y5Q5 1042 aa9.79□□□□□ -0.84
CTNNA1-243ENST00000540387 PAPPA2Q9BXP8 1791 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 TM9SF1O15321 606 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 ATE1O95260 518 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 P4HA1P13674 534 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 BGNP21810 368 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 HOXA13P31271 388 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 ALDH18A1P54886 795 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 HADHBP55084 474 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 ITGADQ13349 1161 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 TMEM132BQ14DG7 1078 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 EPHA7Q15375 998 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 FAM26FQ5R3K3 315 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 TMTC4Q5T4D3 741 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 GPAT2Q6NUI2 795 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 SYDE1Q6ZW31 735 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 ATP6V0D2Q8N8Y2 350 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 REPS2Q8NFH8 660 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 MED30Q96HR3 178 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 WNT8AQ9H1J5 351 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 HIPK3Q9H422 1215 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 HOMER2Q9NSB8 354 aa9.78□□□□□ -0.84
CTNNA1-243ENST00000540387 MRGBPQ9NV56 204 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms