RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 DENND1CQ8IV53 801 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 DHX40Q8IX18 779 aaKnown RBP15.75■□□□□ 0.11
UBE3B-212ENST00000540230 C1orf131Q8NDD1 294 aaKnown RBP15.75■□□□□ 0.11
UBE3B-212ENST00000540230 STK32AQ8WU08 396 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 RNF139Q8WU17 664 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 CPXM1Q96SM3 734 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 PNKPQ96T60 521 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 ZDHHC4Q9NPG8 344 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 OLA1Q9NTK5 396 aaKnown RBP15.75■□□□□ 0.11
UBE3B-212ENST00000540230 PLK2Q9NYY3 685 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 STRIP2Q9ULQ0 834 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 PCDHGC3Q9UN70 934 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 CHURC1-FNTBB4DL54 471 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 GFRA3O60609 400 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 FBXO21O94952 628 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 KAT7O95251 611 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 PAPSS2O95340 614 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-212ENST00000540230 TYRP14679 529 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 TRIP4Q15650 581 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-212ENST00000540230 KLHL40Q2TBA0 621 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 FBXO43Q4G163 708 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 TMEM110Q86TL2 294 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 NKD2Q969F2 451 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-212ENST00000540230 BBS2Q9BXC9 721 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 ARHGEF4Q9NR80 690 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 FAM207AQ9NSI2 230 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-212ENST00000540230 ZSCAN32Q9NX65 697 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 MARK1Q9P0L2 795 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 CFAP54Q96N23 3096 aa15.74■□□□□ 0.11
UBE3B-212ENST00000540230 MYO18AQ92614 2054 aaKnown RBP15.74■□□□□ 0.11
UBE3B-212ENST00000540230 LGALS16A8MUM7 142 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 F8VZ95 297 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 LILRB5O75023 590 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 ACADSBP45954 432 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 PXNP49023 591 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 FNTBP49356 437 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 SYCP1Q15431 976 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 TAF5Q15542 800 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 C2orf27AQ580R0 203 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 EMC10Q5UCC4 262 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 HEATR6Q6AI08 1181 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 USP33Q8TEY7 942 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 EXOC4Q96A65 974 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 FAM149B1Q96BN6 582 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 PLD4Q96BZ4 506 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 NLRC4Q9NPP4 1024 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 NAALADL1Q9UQQ1 740 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 PCDHGA2Q9Y5H1 932 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 EML5Q05BV3 1969 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 SYCE3A1L190 88 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 LRRC10BA6NIK2 292 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 CACNG3O60359 315 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 APODP05090 189 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 NCAM1P13591 858 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 CYP11B1P15538 503 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 POLR2FP61218 127 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 PITX1P78337 314 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 SRSF5Q13243 272 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 PTPN20Q4JDL3 420 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 FKBP15Q5T1M5 1219 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 TAF3Q5VWG9 929 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 FYB2Q5VWT5 728 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 SYPL2Q5VXT5 272 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 ZC3H14Q6PJT7 736 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 TOGARAM2Q6ZUX3 1019 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 NOP9Q86U38 636 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 ADAM32Q8TC27 787 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 DQX1Q8TE96 717 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 DDX1Q92499 740 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 HHIPQ96QV1 700 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 BPIFA3Q9BQP9 254 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 STK33Q9BYT3 514 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 DCLK3Q9C098 648 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 LHX5Q9H2C1 402 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 DNAJC17Q9NVM6 304 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 HCN2Q9UL51 889 aa15.73■□□□□ 0.11
UBE3B-212ENST00000540230 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
UBE3B-212ENST00000540230 GPR179Q6PRD1 2367 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 A0A0A0MRY4 1105 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 IGLV3-27P01718 113 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 ERBB2P04626 1255 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 TPM2P07951 284 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
UBE3B-212ENST00000540230 KRT9P35527 623 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 TIE1P35590 1138 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 GRIA2P42262 883 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 KIR2DL1P43626 348 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-212ENST00000540230 PPP2R5DQ14738 602 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 FAM217AQ8IXS0 508 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 CCDC33Q8N5R6 958 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 TERB1Q8NA31 727 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 SUMF1Q8NBK3 374 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 EPS8L1Q8TE68 723 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 PPP1R13BQ96KQ4 1090 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 CLEC4EQ9ULY5 219 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 ZNF510Q9Y2H8 683 aa15.72■□□□□ 0.11
UBE3B-212ENST00000540230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-212ENST00000540230 ATG13O75143 517 aa15.71■□□□□ 0.11
UBE3B-212ENST00000540230 GFPT2O94808 682 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms