RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 KLHL17Q6TDP4 642 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 HEATR3Q7Z4Q2 680 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 DNAJB7Q7Z6W7 309 aaPredicted RBP6.55□□□□□ -1.36
MRE11-209ENST00000540013 AFG1LQ8WV93 481 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 SNX22Q96L94 193 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 COG8Q96MW5 612 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 TWNKQ96RR1 684 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 FDXACB1Q9BRP7 624 aaPredicted RBP6.55□□□□□ -1.36
MRE11-209ENST00000540013 PI4K2AQ9BTU6 479 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 DDX23Q9BUQ8 820 aaKnown RBP6.55□□□□□ -1.36
MRE11-209ENST00000540013 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 RNPEPQ9H4A4 650 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 MLXIPQ9HAP2 919 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 SEPSECSQ9HD40 501 aaKnown RBP6.55□□□□□ -1.36
MRE11-209ENST00000540013 CNNM1Q9NRU3 951 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 PNPOQ9NVS9 261 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 ZFR2Q9UPR6 939 aaKnown RBP6.55□□□□□ -1.36
MRE11-209ENST00000540013 TMEM5Q9Y2B1 443 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 SLC30A1Q9Y6M5 507 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 NHSQ6T4R5 1651 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 BTAF1O14981 1849 aa6.55□□□□□ -1.36
MRE11-209ENST00000540013 SHANK3Q9BYB0 1731 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 ANKRD26Q9UPS8 1709 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 NSD3Q9BZ95 1437 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 HMX3A6NHT5 357 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 LRRC14BA6NHZ5 514 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 PATE3B3GLJ2 98 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 MATN2O00339 956 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 AP3D1O14617 1153 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 PRRG2O14669 202 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 PLSCR1O15162 318 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 B3GALNT1O75752 331 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 MT-ND3P03897 115 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 TK1P04183 234 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 CSF1P09603 554 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 THEGLP0DJG4 465 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 P4HA1P13674 534 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 PHKA1P46020 1223 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 CLCN2P51788 898 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 UBXN1Q04323 297 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 R3HDM1Q15032 1099 aaKnown RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 RRS1Q15050 365 aaKnown RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 CTXN3Q4LDR2 81 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 C19orf54Q5BKX5 351 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 C3orf38Q5JPI3 329 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 KAZNQ674X7 775 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 ABRAXAS1Q6UWZ7 409 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 BTNL9Q6UXG8 535 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 ZNF783Q6ZMS7 281 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 RAPH1Q70E73 1250 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 LIMS2Q7Z4I7 341 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 POLNQ7Z5Q5 900 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 CCDC91Q7Z6B0 441 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 ADGRE4PQ86SQ3 457 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 GATAD2AQ86YP4 633 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 CMTM4Q8IZR5 234 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 OR8H3Q8N146 312 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 CHST13Q8NET6 341 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 GOT1L1Q8NHS2 421 aaPredicted RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 DPF2Q92785 391 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 ZNF845Q96IR2 970 aaPredicted RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 LOXL4Q96JB6 756 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 FEM1CQ96JP0 617 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 RPL10LQ96L21 214 aaKnown RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 ADI1Q9BV57 179 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 SSBP3Q9BWW4 388 aaPredicted RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 PLA2G12BQ9BX93 195 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 IL23AQ9NPF7 189 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 PIH1D1Q9NWS0 290 aaKnown RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 DCAF16Q9NXF7 216 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 CPA4Q9UI42 421 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 RASAL2Q9UJF2 1139 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 RABL2BQ9UNT1 228 aa6.54□□□□□ -1.36
MRE11-209ENST00000540013 SCAF8Q9UPN6 1271 aaKnown RBP6.54□□□□□ -1.36
MRE11-209ENST00000540013 FLT1P17948 1338 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 SMG6Q86US8 1419 aaKnown RBP6.53□□□□□ -1.36
MRE11-209ENST00000540013 PIP5K1BO14986 540 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 GPR42O15529 346 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 SLC7A4O43246 635 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 TSPAN9O75954 239 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 PGM3O95394 542 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 MT-ND5P03915 603 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 HSPA5P11021 654 aaKnown RBP6.53□□□□□ -1.36
MRE11-209ENST00000540013 GYPEP15421 78 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 MLH1P40692 756 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 HNF4AP41235 474 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 NPEPPSP55786 919 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 RPS16P62249 146 aaKnown RBP6.53□□□□□ -1.36
MRE11-209ENST00000540013 MRPS35P82673 323 aaKnown RBP6.53□□□□□ -1.36
MRE11-209ENST00000540013 CREB5Q02930 508 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 HHEXQ03014 270 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 CHAF1BQ13112 559 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 CUL4BQ13620 913 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 ATP2B3Q16720 1220 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 PARP10Q53GL7 1025 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 ARMC4Q5T2S8 1044 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 ARL6IP4Q66PJ3 421 aaKnown RBP6.53□□□□□ -1.36
MRE11-209ENST00000540013 TCTN3Q6NUS6 607 aa6.53□□□□□ -1.36
MRE11-209ENST00000540013 CNSTQ6PJW8 725 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms