RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SZT2Q5T011 3432 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 H3BQF6 201 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 ITGAVP06756 1048 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 NCAM1P13591 858 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 CPB1P15086 417 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 LAG3P18627 525 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 L1CAMP32004 1257 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 DEFB103AP81534 67 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 SATB1Q01826 763 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 KRT17Q04695 432 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 TRADDQ15628 312 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 ZC3H12AQ5D1E8 599 aaKnown RBP17.55■□□□□ 0.4
COPS3-212ENST00000539941 BSPRYQ5W0U4 402 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 KCNT2Q6UVM3 1135 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 SND1Q7KZF4 910 aaKnown RBP eCLIP17.55■□□□□ 0.4
COPS3-212ENST00000539941 SCN4BQ8IWT1 228 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 NUP93Q8N1F7 819 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.55■□□□□ 0.4
COPS3-212ENST00000539941 PIK3R5Q8WYR1 880 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 CCDC114Q96M63 670 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 DPH5Q9H2P9 285 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 FBXO44Q9H4M3 255 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 FZD10Q9ULW2 581 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 TGM2P21980 687 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 OASLQ15646 514 aaKnown RBP17.54■□□□□ 0.4
COPS3-212ENST00000539941 ANKRD20A8PQ5CZ79 823 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 DDX42Q86XP3 938 aaKnown RBP eCLIP17.54■□□□□ 0.4
COPS3-212ENST00000539941 MREGQ8N565 214 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 CCDC185Q8N715 623 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 GPATCH11Q8N954 259 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 CCDC89Q8N998 374 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 SLC7A14Q8TBB6 771 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 B3GALT6Q96L58 329 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 CEP295NLQ96MC4 621 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 TRIM31Q9BZY9 425 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 DHX35Q9H5Z1 703 aaKnown RBP17.54■□□□□ 0.4
COPS3-212ENST00000539941 ABCC13Q9NSE7 274 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 GPATCH2LQ9NWQ4 482 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 COMMD8Q9NX08 183 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 WHRNQ9P202 907 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 DNPEPQ9ULA0 475 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 SCML2Q9UQR0 700 aa17.54■□□□□ 0.4
COPS3-212ENST00000539941 MTMR11A4FU01 709 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 ZFXP17010 805 aaPredicted RBP17.53■□□□□ 0.4
COPS3-212ENST00000539941 IL4RP24394 825 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 BMP8BP34820 402 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 ATXN1P54253 815 aaKnown RBP17.53■□□□□ 0.4
COPS3-212ENST00000539941 OTUD4Q01804 1114 aaKnown RBP17.53■□□□□ 0.4
COPS3-212ENST00000539941 SCAPQ12770 1279 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 PPIGQ13427 754 aaKnown RBP eCLIP17.53■□□□□ 0.4
COPS3-212ENST00000539941 BTG3Q14201 252 aaPredicted RBP17.53■□□□□ 0.4
COPS3-212ENST00000539941 CA9Q16790 459 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 SPOUT1Q5T280 376 aaKnown RBP17.53■□□□□ 0.4
COPS3-212ENST00000539941 SLC9A4Q6AI14 798 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 SLC8B1Q6J4K2 584 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 ZNF365Q70YC5 407 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 FAM131BQ86XD5 332 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 SLC39A11Q8N1S5 342 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 ARHGAP18Q8N392 663 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 SCAMP5Q8TAC9 235 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 ACTL9Q8TC94 416 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 IL37Q9NZH6 218 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 GRHL1Q9NZI5 618 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 ZNF148Q9UQR1 794 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 SNX24Q9Y343 169 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 NEU2Q9Y3R4 380 aa17.53■□□□□ 0.4
COPS3-212ENST00000539941 APOL1O14791 398 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 RTN3O95197 1032 aaPredicted RBP17.52■□□□□ 0.4
COPS3-212ENST00000539941 SOD2P04179 222 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 RPL21P46778 160 aaKnown RBP17.52■□□□□ 0.4
COPS3-212ENST00000539941 YWHAGP61981 247 aaKnown RBP eCLIP17.52■□□□□ 0.4
COPS3-212ENST00000539941 DYNLT1P63172 113 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 PITX1P78337 314 aaPredicted RBP17.52■□□□□ 0.4
COPS3-212ENST00000539941 MMRN1Q13201 1228 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 NME3Q13232 169 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 PSMD5Q16401 504 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 EFHC2Q5JST6 749 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 TAS1R1Q7RTX1 841 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 ALLCQ8N6M5 410 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 ATAD1Q8NBU5 361 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 FBXO22Q8NEZ5 403 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 TMEM169Q96HH4 297 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 SPATA17Q96L03 361 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 HERC2P3Q9BVR0 1158 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 FAM204AQ9H8W3 233 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 WDR6Q9NNW5 1121 aaKnown RBP17.52■□□□□ 0.4
COPS3-212ENST00000539941 PIGVQ9NUD9 493 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 ZDHHC18Q9NUE0 388 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 MTMR10Q9NXD2 777 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 PRKAG2Q9UGJ0 569 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 ASIC3Q9UHC3 531 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 PLXNA3P51805 1871 aa17.52■□□□□ 0.4
COPS3-212ENST00000539941 FAM92AA1XBS5 289 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 MCF2LO15068 1137 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 ACRP10323 421 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 HAPLN1P10915 354 aaPredicted RBP17.52■□□□□ 0.39
COPS3-212ENST00000539941 ARL4AP40617 200 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 MAGEA10P43363 369 aaPredicted RBP17.52■□□□□ 0.39
COPS3-212ENST00000539941 ZNF135P52742 658 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms