RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 NR3C1P04150 777 aa20.51■□□□□ 0.87
C1RL-207ENST00000539927 RPN1P04843 607 aaKnown RBP20.51■□□□□ 0.87
C1RL-207ENST00000539927 PLA2G4AP47712 749 aa20.51■□□□□ 0.87
C1RL-207ENST00000539927 COL9A2Q14055 689 aaPredicted RBP20.51■□□□□ 0.87
C1RL-207ENST00000539927 SYCP2LQ5T4T6 812 aa20.51■□□□□ 0.87
C1RL-207ENST00000539927 TAF4BQ92750 862 aa20.51■□□□□ 0.87
C1RL-207ENST00000539927 ZNF419Q96HQ0 510 aaPredicted RBP20.51■□□□□ 0.87
C1RL-207ENST00000539927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.51■□□□□ 0.87
C1RL-207ENST00000539927 LAMA5O15230 3695 aa20.51■□□□□ 0.87
C1RL-207ENST00000539927 APC2O95996 2303 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 H0Y626 953 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 TRIM16O95361 564 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 HMBSP08397 361 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 GNSP15586 552 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 KMT5BQ4FZB7 885 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 RESP18Q5W5W9 173 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 SLC9A9Q8IVB4 645 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 HNRNPABQ99729 332 aaKnown RBP20.5■□□□□ 0.87
C1RL-207ENST00000539927 KCTD10Q9H3F6 313 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 FAM124BQ9H5Z6 455 aaPredicted RBP20.5■□□□□ 0.87
C1RL-207ENST00000539927 DNAAF2Q9NVR5 837 aaKnown RBP20.5■□□□□ 0.87
C1RL-207ENST00000539927 SUSD2Q9UGT4 822 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 PCDHA5Q9Y5H7 936 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 STON1Q9Y6Q2 735 aa20.5■□□□□ 0.87
C1RL-207ENST00000539927 URB1O60287 2271 aaKnown RBP20.5■□□□□ 0.87
C1RL-207ENST00000539927 SHROOM3Q8TF72 1996 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 MEI4A8MW99 385 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 GFRA2O00451 464 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 STC2O76061 302 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 CD58P19256 250 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 STARD3Q14849 445 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 TRIP6Q15654 476 aaKnown RBP20.49■□□□□ 0.87
C1RL-207ENST00000539927 ZNF423Q2M1K9 1284 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 WDR45BQ5MNZ6 344 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 Q6ZNB5 142 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 PNPLA1Q8N8W4 532 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 TMC2Q8TDI7 906 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 FOXJ1Q92949 421 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 NT5C1AQ9BXI3 368 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 MMRN2Q9H8L6 949 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 PRDM16Q9HAZ2 1276 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 RASAL2Q9UJF2 1139 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 LHX6Q9UPM6 363 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 FRMD4BQ9Y2L6 1034 aa20.49■□□□□ 0.87
C1RL-207ENST00000539927 CD6P30203 668 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 RING1Q06587 406 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 HNRNPDQ14103 355 aaKnown RBP20.48■□□□□ 0.87
C1RL-207ENST00000539927 FUT11Q495W5 492 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 NAXDQ8IW45 347 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 P2RY11Q96G91 374 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 TOE1Q96GM8 510 aaKnown RBP20.48■□□□□ 0.87
C1RL-207ENST00000539927 GPR174Q9BXC1 333 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 IMPG2Q9BZV3 1241 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 MIR1-1HGQ9H1L0 117 aa20.48■□□□□ 0.87
C1RL-207ENST00000539927 PDXKO00764 312 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 RALAP11233 206 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 PDIA4P13667 645 aaKnown RBP20.47■□□□□ 0.87
C1RL-207ENST00000539927 IL12RB1P42701 662 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 GCLMP48507 274 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 VAMP7P51809 220 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 KIF11P52732 1056 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 INCA1Q0VD86 236 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 EFEMP1Q12805 493 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 GRIK2Q13002 908 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 GEN1Q17RS7 908 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 C1orf220Q5T0J3 134 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 KLHDC10Q6PID8 442 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 LRSAM1Q6UWE0 723 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 RAB44Q7Z6P3 723 aaPredicted RBP20.47■□□□□ 0.87
C1RL-207ENST00000539927 SCD5Q86SK9 330 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 TADA2BQ86TJ2 420 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 CACUL1Q86Y37 369 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 ZCCHC9Q8N567 271 aaKnown RBP20.47■□□□□ 0.87
C1RL-207ENST00000539927 PAGE5Q96GU1 130 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 APOBEC3GQ9HC16 384 aaKnown RBP20.47■□□□□ 0.87
C1RL-207ENST00000539927 PLXNA2O75051 1894 aa20.47■□□□□ 0.87
C1RL-207ENST00000539927 DOCK9Q9BZ29 2069 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 NYNRINQ9P2P1 1898 aaKnown RBP20.46■□□□□ 0.87
C1RL-207ENST00000539927 IKBKBO14920 756 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 ACTN4O43707 911 aaKnown RBP20.46■□□□□ 0.87
C1RL-207ENST00000539927 CALUO43852 315 aaPredicted RBP20.46■□□□□ 0.87
C1RL-207ENST00000539927 GJB3O75712 270 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 F13A1P00488 732 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 KLKB1P03952 638 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 SLFN14P0C7P3 912 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 FTH1P19P0C7X4 201 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 TRIM49P0CI25 452 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 TRIM49CP0CI26 452 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 ZSCAN22P10073 491 aaPredicted RBP20.46■□□□□ 0.87
C1RL-207ENST00000539927 NCAM1P13591 858 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 CORO1AP31146 461 aaKnown RBP20.46■□□□□ 0.87
C1RL-207ENST00000539927 PSEN1P49768 467 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 MFAP3P55082 362 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 SLC14A1Q13336 389 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 ZNF394Q53GI3 561 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 PPP1R26Q5T8A7 1209 aaPredicted RBP20.46■□□□□ 0.87
C1RL-207ENST00000539927 HSCBQ8IWL3 235 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 UCMAQ8WVF2 138 aa20.46■□□□□ 0.87
C1RL-207ENST00000539927 MKRN2Q9H000 416 aaKnown RBP20.46■□□□□ 0.87
C1RL-207ENST00000539927 PNPLA8Q9NP80 782 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms