RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 A0A1W2PQ45 241 aaPredicted RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 A0A1W2PQY0 241 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 M0QYT0 321 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 EBAG9O00559 213 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 NDUFAB1O14561 156 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 SYN3O14994 580 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 KCNN4O15554 427 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 MTSS1O43312 755 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 MGEA5O60502 916 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 GCATO75600 419 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 POMCP01189 267 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 LTFP02788 710 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 ZSCAN5DPP0CG00 497 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 SELPP16109 830 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 IL4RP24394 825 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 SLC18A1P54219 525 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 ATN1P54259 1190 aaPredicted RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 BASP1P80723 227 aaKnown RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 CDK16Q00536 496 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 YWHAHQ04917 246 aaPredicted RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 SMARCB1Q12824 385 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 PDIA2Q13087 525 aaKnown RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 PDK1Q15118 436 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 TAF5Q15542 800 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 KYNUQ16719 465 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 NOMO2Q5JPE7 1267 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 SH3PXD2AQ5TCZ1 1133 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 HEATR6Q6AI08 1181 aaKnown RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 PM20D1Q6GTS8 502 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 C1orf228Q6PIY5 440 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 LRRC31Q6UY01 552 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 PAQR9Q6ZVX9 377 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 LRRC8DQ7L1W4 858 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 TADA2BQ86TJ2 420 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 SPATA2LQ8IUW3 424 aaPredicted RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 ABI1Q8IZP0 508 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 VPS52Q8N1B4 723 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 ARHGAP18Q8N392 663 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 PQLC3Q8N755 202 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 FAM71DQ8N9W8 422 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 MCUQ8NE86 351 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 PCDH19Q8TAB3 1148 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 EPS8L3Q8TE67 593 aaKnown RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 CPT1BQ92523 772 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 FUBP3Q96I24 572 aaKnown RBP eCLIP10.55□□□□□ -0.72
SPARC-209ENST00000539687 QKIQ96PU8 341 aaKnown RBP eCLIP10.55□□□□□ -0.72
SPARC-209ENST00000539687 CSPG4P5Q96PW8 444 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 ULBP1Q9BZM6 244 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 NSRP1Q9H0G5 558 aaKnown RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 TMEM161AQ9NX61 479 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 MIOSQ9NXC5 875 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 XPO7Q9UIA9 1087 aaKnown RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 GGA2Q9UJY4 613 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 CLUHO75153 1309 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 ATXN2Q99700 1313 aaKnown RBP10.55□□□□□ -0.72
SPARC-209ENST00000539687 MYBPHLA2RUH7 354 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 GMNCA6NCL1 334 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 C5orf60A6NFR6 353 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 MEIS3P2A8K0S8 358 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 DNM1LO00429 736 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 HCRTO43612 131 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 ATP2C2O75185 946 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 TRPA1O75762 1119 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 FAM107AO95990 144 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 TPSB2P20231 275 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 MX2P20592 715 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 GRK4P32298 578 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 GBP2P32456 591 aaPredicted RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 STX2P32856 288 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 SERPINB6P35237 376 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 FDFT1P37268 417 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 ELAVL2Q12926 359 aaKnown RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 MMRN1Q13201 1228 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 MTA1Q13330 715 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 PAFAH1B3Q15102 231 aaKnown RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 TPSAB1Q15661 275 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 CCDC142Q17RM4 750 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 CCDC38Q502W7 563 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 ZC3H12AQ5D1E8 599 aaKnown RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 ACBD5Q5T8D3 534 aaPredicted RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 ARHGEF18Q6ZSZ5 1173 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 ZC3H18Q86VM9 953 aaKnown RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 CCNJLQ8IV13 435 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 UNC45BQ8IWX7 931 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 PALM2Q8IXS6 379 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 ZBED8Q8IZ13 594 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 CLEC4CQ8WTT0 213 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 RNF139Q8WU17 664 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 TFB1MQ8WVM0 346 aaKnown RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 SEPT8Q92599 483 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 ARHGEF2Q92974 986 aaKnown RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 C9orf72Q96LT7 481 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 KCTD15Q96SI1 283 aaPredicted RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 EPAS1Q99814 870 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 SMOQ99835 787 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 SELENOSQ9BQE4 189 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
SPARC-209ENST00000539687 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.54□□□□□ -0.72
SPARC-209ENST00000539687 CCDC134Q9H6E4 229 aa10.54□□□□□ -0.72
SPARC-209ENST00000539687 VPS37BQ9H9H4 285 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms