RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 HPS4Q9NQG7 708 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 DUS2Q9NX74 493 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 WDR35Q9P2L0 1181 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 CA14Q9ULX7 337 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 MIA3Q5JRA6 1907 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 A0A087X0T9 212 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 KLKB1P03952 638 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 FAM228BP0C875 321 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 NOS2P35228 1153 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 PFKPQ01813 784 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 TRIP4Q15650 581 aaPredicted RBP13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 EML3Q32P44 896 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 TRNP1Q6NT89 227 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 PPP1R2P3Q6NXS1 205 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 HTR3DQ70Z44 454 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 VPS36Q86VN1 386 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 BBS7Q8IWZ6 715 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 JOSD2Q8TAC2 188 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 CSGALNACT1Q8TDX6 532 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 DNASE1L2Q92874 299 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 PLD4Q96BZ4 506 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 SELENOOQ9BVL4 669 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 GTSE1Q9NYZ3 720 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 TMEM59LQ9UK28 342 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 HBS1LQ9Y450 684 aaKnown RBP13.26□□□□□ -0.29
TSPAN9-207ENST00000539631 MYOFQ9NZM1 2061 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 TCRBV5S1A1TA0A578 114 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 GOLGA6L3A6NEY3 463 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 TRUB2O95900 331 aaKnown RBP13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 IGLV3-25P01717 112 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 RRM1P23921 792 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 CORO1AP31146 461 aaKnown RBP13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 FLT3P36888 993 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 MATKP42679 507 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 TBX4P57082 545 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 CDK17Q00537 523 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 GFPT1Q06210 699 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 SIGLEC14Q08ET2 396 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 RUNX3Q13761 415 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 PDGFRLQ15198 375 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 ASTE1Q2TB18 679 aaPredicted RBP13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 SLC44A4Q53GD3 710 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 Q6ZNB5 142 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 EMC1Q8N766 993 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 KIAA1958Q8N8K9 716 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 C3orf20Q8ND61 904 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 VCPIP1Q96JH7 1222 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 SERPINB11Q96P15 392 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 DDX23Q9BUQ8 820 aaKnown RBP13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 ADAM33Q9BZ11 813 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 ISCUQ9H1K1 167 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 GRPEL1Q9HAV7 217 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 TRPV5Q9NQA5 729 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 TBC1D14Q9P2M4 693 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 WNT16Q9UBV4 365 aa13.25□□□□□ -0.29
TSPAN9-207ENST00000539631 SYNJ2BP-COX16A0A087WUM0 186 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 SSU72P8A0A1W2PR75 194 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 KRBA1A5PL33 1030 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 OTOL1A6NHN0 477 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 M0QYT0 321 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 SLC9A3R1O14745 358 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 IRAK2O43187 625 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 IGLV3-27P01718 113 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 KRT3P12035 628 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 TFE3P19532 575 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 SOX9P48436 509 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 SULT1E1P49888 294 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 KPNA1P52294 538 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 EIF4EBP2Q13542 120 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 ITPRIPL2Q3MIP1 535 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 CCDC122Q5T0U0 273 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 OTUD1Q5VV17 481 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 TRIM67Q6ZTA4 783 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 ARCQ7LC44 396 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 DENND1CQ8IV53 801 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 ADGRG2Q8IZP9 1017 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 SIX5Q8N196 739 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 RXFP2Q8WXD0 754 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 ATP2A3Q93084 1043 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 SLC39A13Q96H72 371 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 FCRL2Q96LA5 508 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 TBCBQ99426 244 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 NPY6RQ99463 290 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 DCLK3Q9C098 648 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 DEF6Q9H4E7 631 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 ECT2Q9H8V3 914 aa13.24□□□□□ -0.29
TSPAN9-207ENST00000539631 FAM204AQ9H8W3 233 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms