RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 METTL18O95568 372 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 ZBED1O96006 694 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 F7P08709 466 aaPredicted RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 XRRA1Q6P2D8 792 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 EEPD1Q7L9B9 569 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 SLC4A11Q8NBS3 891 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 ACO2Q99798 780 aaKnown RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 IL1RAPL1Q9NZN1 696 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 CPSF3Q9UKF6 684 aaKnown RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 ADAMTS5Q9UNA0 930 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 DICER1Q9UPY3 1922 aaKnown RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 SNNO75324 88 aaPredicted RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 CXCL8P10145 99 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 PDGFRAP16234 1089 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 RGS7P49802 495 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 TMEM132AQ24JP5 1023 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 FASTKD1Q53R41 847 aaKnown RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 RASSF3Q86WH2 238 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 MRPL4Q9BYD3 311 aaKnown RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 COL11A1P12107 1806 aaPredicted RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 LOC100653049A0A140TA62 436 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 SDR42E2A6NKP2 422 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 OGTO15294 1046 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 KRT34O76011 436 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 IL4RP24394 825 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 PRKCHP24723 683 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 CRABP2P29373 138 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 DNAL1Q4LDG9 190 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 PPP6R3Q5H9R7 873 aaPredicted RBP20.99■□□□□ 0.95
TMEM260-203ENST00000539559 EEF1DP3Q658K8 133 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 OR6B2Q6IFH4 312 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 DPY19L2Q6NUT2 758 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 TRIM50Q86XT4 487 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 REPS2Q8NFH8 660 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.99■□□□□ 0.95
TMEM260-203ENST00000539559 ZFAND2BQ8WV99 257 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 RNF157Q96PX1 679 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 PNPLA8Q9NP80 782 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 NGRNQ9NPE2 291 aaKnown RBP20.99■□□□□ 0.95
TMEM260-203ENST00000539559 ADARB2Q9NS39 739 aaKnown RBP20.99■□□□□ 0.95
TMEM260-203ENST00000539559 PAK5Q9P286 719 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 ADAMTS6Q9UKP5 1117 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 AFG3L2Q9Y4W6 797 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 MGAMO43451 1857 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 ANKRD33BA6NCL7 494 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 PRKCBP05771 671 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 SERPINA6P08185 405 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 CCNFP41002 786 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 HIC1Q14526 733 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 CATSPERGQ6ZRH7 1159 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 PQLC3Q8N755 202 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 PGLYRP2Q96PD5 576 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 NR1H4Q96RI1 486 aaPredicted RBP20.99■□□□□ 0.95
TMEM260-203ENST00000539559 LHX5Q9H2C1 402 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 TMEM134Q9H6X4 195 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 SIX4Q9UIU6 781 aa20.99■□□□□ 0.95
TMEM260-203ENST00000539559 KLHL33A6NCF5 533 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 SPAG6O75602 509 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 USP2O75604 605 aaPredicted RBP20.98■□□□□ 0.95
TMEM260-203ENST00000539559 PROCP04070 461 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 PEX2P28328 305 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 ABCD1P33897 745 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 RPS6KA3P51812 740 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 BCAR1P56945 870 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 PTPN11Q06124 597 aaPredicted RBP20.98■□□□□ 0.95
TMEM260-203ENST00000539559 ASPHQ12797 758 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 GSTA3Q16772 222 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 TCHHL1Q5QJ38 904 aaPredicted RBP20.98■□□□□ 0.95
TMEM260-203ENST00000539559 DEPDC1BQ8WUY9 529 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 OCEL1Q9H607 264 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 S100A14Q9HCY8 104 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 PNPOQ9NVS9 261 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 ASNSD1Q9NWL6 643 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 SOX13Q9UN79 622 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.98■□□□□ 0.95
TMEM260-203ENST00000539559 OPHN1O60890 802 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 KRT38O76015 456 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 NFICP08651 508 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 AQP4P55087 323 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 TUBB3Q13509 450 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 ZNF667Q5HYK9 610 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 LGSNQ5TDP6 509 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 ZNF534Q76KX8 674 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 TRIM42Q8IWZ5 723 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 HOXC10Q9NYD6 342 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 RNF181Q9P0P0 153 aa20.98■□□□□ 0.95
TMEM260-203ENST00000539559 MYO18AQ92614 2054 aaKnown RBP20.97■□□□□ 0.95
TMEM260-203ENST00000539559 MED7O43513 233 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 PRPSAP2O60256 369 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 GSRP00390 522 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 TNNC2P02585 160 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 SPATA31D3P0C874 917 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 CD1EP15812 388 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 GRIA2P42262 883 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 SPATA31D4Q6ZUB0 917 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 MAVSQ7Z434 540 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 OR6Y1Q8NGX8 325 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 PCDH19Q8TAB3 1148 aa20.97■□□□□ 0.95
TMEM260-203ENST00000539559 HEXIM2Q96MH2 286 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms