RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FAXCQ5TGI0 409 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 AP1ARQ63HQ0 302 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 EEF1DP3Q658K8 133 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 MTHFD1LQ6UB35 978 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 ADGRF2Q8IZF7 708 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 C1orf127Q8N9H9 656 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 CHST13Q8NET6 341 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 PCDH19Q8TAB3 1148 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 UBA3Q8TBC4 463 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 FGD4Q96M96 766 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 HEXIM2Q96MH2 286 aaKnown RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 STN1Q9H668 368 aaKnown RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 VRTNQ9H8Y1 702 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 RPF1Q9H9Y2 349 aaKnown RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 PCDH18Q9HCL0 1135 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 PICK1Q9NRD5 415 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 PCMTD2Q9NV79 361 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 SOX13Q9UN79 622 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 AFG3L2Q9Y4W6 797 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 PCDHA11Q9Y5I1 949 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 HEY1Q9Y5J3 304 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 ZNF487B1APH4 448 aa10□□□□□ -0.81
CDH13-204ENST00000539548 DPYSL4O14531 572 aa10□□□□□ -0.81
CDH13-204ENST00000539548 BUD23O43709 281 aaKnown RBP10□□□□□ -0.81
CDH13-204ENST00000539548 KLHL2O95198 593 aa10□□□□□ -0.81
CDH13-204ENST00000539548 EGFRP00533 1210 aa10□□□□□ -0.81
CDH13-204ENST00000539548 TUBB3Q13509 450 aa10□□□□□ -0.81
CDH13-204ENST00000539548 CCDC14Q49A88 953 aa10□□□□□ -0.81
CDH13-204ENST00000539548 MROH9Q5TGP6 573 aa10□□□□□ -0.81
CDH13-204ENST00000539548 C1orf146Q5VVC0 180 aa10□□□□□ -0.81
CDH13-204ENST00000539548 OR6B2Q6IFH4 312 aa10□□□□□ -0.81
CDH13-204ENST00000539548 TRMT10BQ6PF06 316 aaKnown RBP10□□□□□ -0.81
CDH13-204ENST00000539548 IZUMO2Q6UXV1 221 aa10□□□□□ -0.81
CDH13-204ENST00000539548 FAM183BPQ6ZVS7 135 aa10□□□□□ -0.81
CDH13-204ENST00000539548 ZNF534Q76KX8 674 aa10□□□□□ -0.81
CDH13-204ENST00000539548 SESTD1Q86VW0 696 aa10□□□□□ -0.81
CDH13-204ENST00000539548 CDKL3Q8IVW4 592 aaPredicted RBP10□□□□□ -0.81
CDH13-204ENST00000539548 CEP120Q8N960 986 aa10□□□□□ -0.81
CDH13-204ENST00000539548 CXorf38Q8TB03 319 aa10□□□□□ -0.81
CDH13-204ENST00000539548 ACMSDQ8TDX5 336 aa10□□□□□ -0.81
CDH13-204ENST00000539548 PPP2R3CQ969Q6 453 aa10□□□□□ -0.81
CDH13-204ENST00000539548 GBP5Q96PP8 586 aa10□□□□□ -0.81
CDH13-204ENST00000539548 TBCBQ99426 244 aa10□□□□□ -0.81
CDH13-204ENST00000539548 GCOM2Q9BZD3 368 aaPredicted RBP10□□□□□ -0.81
CDH13-204ENST00000539548 XAB2Q9HCS7 855 aaKnown RBP10□□□□□ -0.81
CDH13-204ENST00000539548 MOCS1Q9NZB8 636 aa10□□□□□ -0.81
CDH13-204ENST00000539548 MARCOQ9UEW3 520 aaPredicted RBP10□□□□□ -0.81
CDH13-204ENST00000539548 KIAA1257Q9ULG3 409 aa10□□□□□ -0.81
CDH13-204ENST00000539548 TNFSF13BQ9Y275 285 aa10□□□□□ -0.81
CDH13-204ENST00000539548 ANKRD33BA6NCL7 494 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 LACTBL1A8MY62 500 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 ZBTB42B2RXF5 422 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 CSDE1O75534 798 aaKnown RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 TOMM70O94826 608 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 GSRP00390 522 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 C6orf222P0C671 652 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 CXCL8P10145 99 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 TGFB3P10600 412 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 INHBEP58166 350 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 UBAP2LQ14157 1087 aaKnown RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 FASTKD1Q53R41 847 aaKnown RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 FAM182AQ5T1J6 154 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 LCLAT1Q6UWP7 414 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 WDR75Q8IWA0 830 aaKnown RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 ARHGAP18Q8N392 663 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 TTC1Q99614 292 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 EBF4Q9BQW3 602 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 CDT1Q9H211 546 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 SPON1Q9HCB6 807 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 GBA2Q9HCG7 927 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 S100A14Q9HCY8 104 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 GPATCH2LQ9NWQ4 482 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 ZDHHC7Q9NXF8 308 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 PPM1HQ9ULR3 514 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 MAD1L1Q9Y6D9 718 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 CCNT2O60583 730 aaKnown RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 METTL18O95568 372 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 BAG2O95816 211 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 ITGB3P05106 788 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 NFICP08651 508 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 UBTFL6P0CB48 400 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 P4HA1P13674 534 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 CYP3A5P20815 502 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 EDNRBP24530 442 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 L1CAMP32004 1257 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 RAB27AP51159 221 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 HIC1Q14526 733 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 CDO1Q16878 200 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 RABGAP1LQ5R372 815 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 TEDDM1Q5T9Z0 273 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 MAP1SQ66K74 1059 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 MBLAC2Q68D91 279 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 SCYL2Q6P3W7 929 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 TMEM192Q8IY95 271 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 LRRC71Q8N4P6 559 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 PPP1R14CQ8TAE6 165 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 PIWIL2Q8TC59 973 aaKnown RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 DEPDC1BQ8WUY9 529 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 ZNF778Q96MU6 729 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms