RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 DDX23Q9BUQ8 820 aaKnown RBP17.76■□□□□ 0.43
PCDHB17P-201ENST00000539533 ULBP1Q9BZM6 244 aa17.76■□□□□ 0.43
PCDHB17P-201ENST00000539533 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDHB17P-201ENST00000539533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDHB17P-201ENST00000539533 PCDH10Q9P2E7 1040 aa17.76■□□□□ 0.43
PCDHB17P-201ENST00000539533 TBX21Q9UL17 535 aa17.76■□□□□ 0.43
PCDHB17P-201ENST00000539533 ECEL1O95672 775 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 PTPN9P43378 593 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 IFNAR2P48551 515 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 DYNLT1P63172 113 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 C1orf53Q5VUE5 145 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 TRPM8Q7Z2W7 1104 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 CCDC63Q8NA47 563 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 CENPIQ92674 756 aaPredicted RBP17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 ART4Q93070 314 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 CALN1Q9BXU9 219 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 NSRP1Q9H0G5 558 aaKnown RBP17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 CSNK1G1Q9HCP0 422 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 GPATCH2LQ9NWQ4 482 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 SAE1Q9UBE0 346 aaPredicted RBP17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 ARHGEF37A1IGU5 675 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 PBX3P40426 434 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 YWHAZP63104 245 aaKnown RBP17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 TSPY1Q01534 308 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 TAZQ16635 292 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 ZC3H12AQ5D1E8 599 aaKnown RBP17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 RAB41Q5JT25 222 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 TLDC1Q6P9B6 456 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 NPAS4Q8IUM7 802 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 VWCEQ96DN2 955 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 PAWRQ96IZ0 340 aaKnown RBP17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 RUNDC3BQ96NL0 473 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 TBCBQ99426 244 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 TMEM39AQ9NV64 488 aa17.75■□□□□ 0.43
PCDHB17P-201ENST00000539533 TBKBP1A7MCY6 615 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 CAPN15O75808 1086 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 UPP2O95045 317 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 ALDH2P05091 517 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 RPSAP08865 295 aaKnown RBP17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 USP17L7P0C7H9 530 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 MATKP42679 507 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 CDH6P55285 790 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 PITX1P78337 314 aaPredicted RBP17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 MMRN1Q13201 1228 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 DCAF6Q58WW2 860 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 MFSD5Q6N075 450 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 TAOK1Q7L7X3 1001 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 KIRREL3Q8IZU9 778 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 ATL2Q8NHH9 583 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 B3GALT6Q96L58 329 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 GPR62Q9BZJ7 368 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 NOD2Q9HC29 1040 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 HOMER3Q9NSC5 361 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 DNPEPQ9ULA0 475 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 YJEFN3A6XGL0 299 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 E7ENQ6 273 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 CST8O60676 142 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 GBP2P32456 591 aaPredicted RBP17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 GJA8P48165 433 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 SLC11A1P49279 550 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 ARSEP51690 589 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 KRT17Q04695 432 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 TRIP13Q15645 432 aaPredicted RBP17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 CA9Q16790 459 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 CCDC38Q502W7 563 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 FAM133BQ5BKY9 247 aaKnown RBP17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 SYPL2Q5VXT5 272 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 SLCO2A1Q92959 643 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 ARMC5Q96C12 935 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 MAGEB5Q9BZ81 275 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 SLC24A3Q9HC58 644 aa17.74■□□□□ 0.43
PCDHB17P-201ENST00000539533 PPP1R12AO14974 1030 aaPredicted RBP17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 LIASO43766 372 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 ENDOD1O94919 500 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 OAZ2O95190 189 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 PARNO95453 639 aaKnown RBP17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 FYNP06241 537 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 DAOAP59103 153 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 C1QTNF8P60827 252 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 NAA25Q14CX7 972 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 BOLA3Q53S33 107 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 FAM171A1Q5VUB5 890 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 SNRNP25Q9BV90 132 aaKnown RBP17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 ABCF3Q9NUQ8 709 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 MARCH5Q9NX47 278 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 BAIAP2L1Q9UHR4 511 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 NAALADL1Q9UQQ1 740 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 KIAA0100Q14667 2235 aaKnown RBP17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 DESP17661 470 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 CYP2F1P24903 491 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 DPYSL3Q14195 570 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 LRRC26Q2I0M4 334 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 SLC39A12Q504Y0 691 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 VARS2Q5ST30 1063 aaKnown RBP17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 CCDC25Q86WR0 208 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 ROPN1BQ9BZX4 212 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms