RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 PAPLNO95428 1278 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 GLP2RO95838 553 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 TUBP50607 506 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 EPHA5P54756 1037 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 HADHQ16836 314 aaKnown RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 SMTNL2Q2TAL5 461 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 KCNT1Q5JUK3 1230 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 C10orf120Q5SQS8 335 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 ZNF276Q8N554 614 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 ACSF2Q96CM8 615 aaPredicted RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 PRKD2Q9BZL6 878 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 ZWILCHQ9H900 591 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 ASAH2Q9NR71 780 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 OLA1Q9NTK5 396 aaKnown RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 LMCD1Q9NZU5 365 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 XIRP2A4UGR9 3374 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 XYLBO75191 536 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 OAS1P00973 400 aaKnown RBP11.89□□□□□ -0.51
FAM60A-206ENST00000539409 PRLRP16471 622 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 TCP1P17987 556 aaKnown RBP11.89□□□□□ -0.51
FAM60A-206ENST00000539409 GABRR2P28476 465 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 EFEMP1Q12805 493 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 ATP13A4Q4VNC1 1196 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 HECTD3Q5T447 861 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 KATNAL2Q8IYT4 538 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 COG1Q8WTW3 980 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 IGFLR1Q9H665 355 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 KLHL11Q9NVR0 708 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.89□□□□□ -0.514e-7■■■□□ 16.5
FAM60A-206ENST00000539409 EYSQ5T1H1 3165 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 DOCK6Q96HP0 2047 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 NOTCH4Q99466 2003 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 C2orf78A6NCI8 922 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 ZNF185O15231 689 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 COCHO43405 550 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 URI1O94763 535 aaPredicted RBP11.89□□□□□ -0.51
FAM60A-206ENST00000539409 F9P00740 461 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 KRT7P08729 469 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 CCR2P41597 374 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 CXCR3P49682 368 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 RWDD2BP57060 319 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 PABPC1LQ4VXU2 614 aaKnown RBP11.89□□□□□ -0.51
FAM60A-206ENST00000539409 KLHDC10Q6PID8 442 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 EFHBQ8N7U6 833 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 C12orf76Q8N812 135 aaPredicted RBP11.89□□□□□ -0.51
FAM60A-206ENST00000539409 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
FAM60A-206ENST00000539409 CARD9Q9H257 536 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 DZANK1Q9NVP4 752 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 MARCH2Q9P0N8 246 aa11.89□□□□□ -0.51
FAM60A-206ENST00000539409 DNMT3BQ9UBC3 853 aaKnown RBP11.89□□□□□ -0.51
FAM60A-206ENST00000539409 PRRC2BQ5JSZ5 2229 aaKnown RBP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 I6L893 689 aaPredicted RBP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 LINC01565O15544 149 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 RHOP08100 348 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 RARAP10276 462 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 CDC25CP30307 473 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 TMEM184AQ6ZMB5 413 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 MIB1Q86YT6 1006 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 TEKT4Q8WW24 435 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 LRCH3Q96II8 777 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 SNRNP25Q9BV90 132 aaKnown RBP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 ANLNQ9NQW6 1124 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 TLR6Q9Y2C9 796 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 C2orf16Q68DN1 1984 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 A0A1W2PRU2 124 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 CES2O00748 559 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 KRT1P04264 644 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 PYGMP11217 842 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 MYL4P12829 197 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 PTPN2P17706 415 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 GBP1P32455 592 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 CYP4F8P98187 520 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 ZNF211Q13398 564 aaPredicted RBP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 NNTQ13423 1086 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 ADGRE1Q14246 886 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 SND1Q7KZF4 910 aaKnown RBP eCLIP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 TADA2BQ86TJ2 420 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 CMASQ8NFW8 434 aaPredicted RBP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 HSPH1Q92598 858 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 TMPRSS4Q9NRS4 437 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 GPATCH2LQ9NWQ4 482 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
FAM60A-206ENST00000539409 RASAL2Q9UJF2 1139 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 DNMT3LQ9UJW3 386 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 MRFAP1Q9Y605 127 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 MTCH2Q9Y6C9 303 aa11.88□□□□□ -0.51
FAM60A-206ENST00000539409 OLFM2O95897 454 aa11.87□□□□□ -0.51
FAM60A-206ENST00000539409 GJA1P17302 382 aa11.87□□□□□ -0.51
FAM60A-206ENST00000539409 ATP5C1P36542 298 aaKnown RBP11.87□□□□□ -0.51
FAM60A-206ENST00000539409 CA9Q16790 459 aa11.87□□□□□ -0.51
FAM60A-206ENST00000539409 SLC5A9Q2M3M2 681 aa11.87□□□□□ -0.51
FAM60A-206ENST00000539409 BOLA3Q53S33 107 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms