RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 NT5C3BQ969T7 300 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 MYLPFQ96A32 169 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 MAGOHBQ96A72 148 aaKnown RBP9.21□□□□□ -0.94
DDB1-213ENST00000539332 LRRC45Q96CN5 670 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 CCDC114Q96M63 670 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 SLC2A13Q96QE2 648 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 TMEM209Q96SK2 561 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 TBCBQ99426 244 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 EPB41L5Q9HCM4 733 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 HOMER3Q9NSC5 361 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 USP18Q9UMW8 372 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 PCDHB12Q9Y5F1 795 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 TRIOBPQ9H2D6 2365 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 PPP1R12AO14974 1030 aaPredicted RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 MDM4O15151 490 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 GRAP2O75791 330 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 AP1G2O75843 785 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 KDELR1P24390 212 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 SDC4P31431 198 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 CETN2P41208 172 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 RABGGTBP53611 331 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 CACNA2D1P54289 1103 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 MRPS5P82675 430 aaKnown RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 ADIGQ0VDE8 80 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 MTMR3Q13615 1198 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 MAPRE1Q15691 268 aaKnown RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 CCNG2Q16589 344 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 C15orf59Q2T9L4 293 aaPredicted RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 CTXN3Q4LDR2 81 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 TFDP3Q5H9I0 405 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 EFHC1Q5JVL4 640 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 FAM109BQ6ICB4 259 aaPredicted RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 ZNF280DQ6N043 979 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 CCDC137Q6PK04 289 aaKnown RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 SYDE1Q6ZW31 735 aaPredicted RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 ANKS3Q6ZW76 656 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 BHLHA9Q7RTU4 235 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 DDX53Q86TM3 631 aaKnown RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 CCHCR1Q8TD31 782 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 PMM1Q92871 262 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 MIEF2Q96C03 454 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 CFAP57Q96MR6 1250 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 ERP44Q9BS26 406 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 ADAM33Q9BZ11 813 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 RAB17Q9H0T7 212 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 SLC40A1Q9NP59 571 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 CNGB3Q9NQW8 809 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 BATF3Q9NR55 127 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 FAM114A2Q9NRY5 505 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 CHST7Q9NS84 486 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 TMLHEQ9NVH6 421 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 R3HDM2Q9Y2K5 976 aaKnown RBP9.2□□□□□ -0.94
DDB1-213ENST00000539332 NEU2Q9Y3R4 380 aa9.2□□□□□ -0.94
DDB1-213ENST00000539332 ESYT3A0FGR9 886 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 GMNCA6NCL1 334 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 C5orf60A6NFR6 353 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 OR6C75A6NL08 312 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 GRXCR1A8MXD5 290 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 PI4K2BG5E9Z4 385 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 TBC1D4O60343 1298 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 FGF18O76093 207 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 SOD2P04179 222 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 OR4Q2P0C623 313 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 MYZAPP0CAP1 466 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 LCP1P13796 627 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 GJC1P36383 396 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 MATKP42679 507 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 SSR1P43307 286 aaKnown RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 HDAC4P56524 1084 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 MAP3K7CLP57077 242 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 DAOAP59103 153 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 ADCY2Q08462 1091 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 RAB6CQ53S08 254 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 SH3PXD2AQ5TCZ1 1133 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 AGBL2Q5U5Z8 902 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 OTUD1Q5VV17 481 aaPredicted RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 KIAA1841Q6NSI8 718 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 PRSS55Q6UWB4 352 aaPredicted RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 RSPO2Q6UXX9 243 aaPredicted RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 BBS12Q6ZW61 710 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 STRADAQ7RTN6 431 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 FAM172AQ8WUF8 416 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 N4BP2L2Q92802 583 aaPredicted RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 GDF15Q99988 308 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 TRIM51Q9BSJ1 452 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 MED10Q9BTT4 135 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 FRMD8P1Q9BZ68 369 aaPredicted RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 FAM129AQ9BZQ8 928 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 UBE2OQ9C0C9 1292 aaKnown RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 ZCWPW1Q9H0M4 648 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 RAB6CQ9H0N0 254 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 CNOT10Q9H9A5 744 aaKnown RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 KLHL11Q9NVR0 708 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 RASAL2Q9UJF2 1139 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 UTP11Q9Y3A2 253 aaKnown RBP9.19□□□□□ -0.94
DDB1-213ENST00000539332 DOCK4Q8N1I0 1966 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 LRRD1A4D1F6 860 aa9.19□□□□□ -0.94
DDB1-213ENST00000539332 LINC01553A4QN01 128 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms