RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PAK1Q13153 545 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 EGFLAMQ63HQ2 1017 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 PM20D1Q6GTS8 502 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 TMEM270Q6UE05 265 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 BHMTQ93088 406 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 THADAQ6YHU6 1953 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 TPRP12270 2363 aaKnown RBP23.27■■□□□ 1.32
SCARB1-206ENST00000539320 BCLAF3A2AJT9 711 aaKnown RBP23.27■■□□□ 1.32
SCARB1-206ENST00000539320 KLKB1P03952 638 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 PAEPP09466 180 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 HOXB2P14652 356 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 DGKGP49619 791 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 TOGARAM2Q6ZUX3 1019 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 BHLHA9Q7RTU4 235 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 SIX6OS1Q8N1H7 587 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 PPM1KQ8N3J5 372 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 PLK2Q9NYY3 685 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 HCN2Q9UL51 889 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 KIAA1257Q9ULG3 409 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 PCDHB4Q9Y5E5 795 aa23.27■■□□□ 1.32
SCARB1-206ENST00000539320 NUP205Q92621 2012 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 SLC12A8A0AV02 714 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 CAVIN2O95810 425 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 GNA14O95837 355 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 PENKP01210 267 aaPredicted RBP23.26■■□□□ 1.31
SCARB1-206ENST00000539320 NTSR1P30989 418 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 P2RY2P41231 377 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 STX17P56962 302 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 IL31Q6EBC2 164 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 TCEAL6Q6IPX3 200 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 CYP2U1Q7Z449 544 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 TRIM59Q8IWR1 403 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 UBA3Q8TBC4 463 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 NDRG1Q92597 394 aaKnown RBP23.26■■□□□ 1.31
SCARB1-206ENST00000539320 KAT5Q92993 513 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 TCEAL3Q969E4 200 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 PLD4Q96BZ4 506 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 IPO9Q96P70 1041 aaKnown RBP23.26■■□□□ 1.31
SCARB1-206ENST00000539320 RXFP3Q9NSD7 469 aa23.26■■□□□ 1.31
SCARB1-206ENST00000539320 OLA1Q9NTK5 396 aaKnown RBP23.26■■□□□ 1.31
SCARB1-206ENST00000539320 PLXND1Q9Y4D7 1925 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 GON4LQ3T8J9 2241 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 PRRT4C9JH25 899 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 CHKAP35790 457 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 WASP42768 502 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 PKDCCQ504Y2 493 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 LCLAT1Q6UWP7 414 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 CHPFQ8IZ52 775 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 PGBD3Q8N328 593 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 LMO3Q8TAP4 145 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 RLN3Q8WXF3 142 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 KCTD13Q8WZ19 329 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 TFAP2BQ92481 460 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 P2RY11Q96G91 374 aa23.25■■□□□ 1.31
SCARB1-206ENST00000539320 CISD3P0C7P0 127 aa23.24■■□□□ 1.31
SCARB1-206ENST00000539320 MARSP56192 900 aaKnown RBP23.24■■□□□ 1.31
SCARB1-206ENST00000539320 BYSLQ13895 437 aaKnown RBP23.24■■□□□ 1.31
SCARB1-206ENST00000539320 FYB2Q5VWT5 728 aa23.24■■□□□ 1.31
SCARB1-206ENST00000539320 DENND1CQ8IV53 801 aa23.24■■□□□ 1.31
SCARB1-206ENST00000539320 TRIML1Q8N9V2 468 aa23.24■■□□□ 1.31
SCARB1-206ENST00000539320 RBBP8NLQ8NC74 664 aaPredicted RBP23.24■■□□□ 1.31
SCARB1-206ENST00000539320 RNF139Q8WU17 664 aa23.24■■□□□ 1.31
SCARB1-206ENST00000539320 CNGB3Q9NQW8 809 aa23.24■■□□□ 1.31
SCARB1-206ENST00000539320 FBXO10Q9UK96 956 aa23.24■■□□□ 1.31
SCARB1-206ENST00000539320 AGO1Q9UL18 857 aaKnown RBP23.24■■□□□ 1.31
SCARB1-206ENST00000539320 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.24■■□□□ 1.31
SCARB1-206ENST00000539320 M0QYV0 167 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 GABRG2P18507 467 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 BRD2P25440 801 aaKnown RBP23.23■■□□□ 1.31
SCARB1-206ENST00000539320 DHPSP49366 369 aaPredicted RBP23.23■■□□□ 1.31
SCARB1-206ENST00000539320 GCNT1Q02742 428 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 KCNH2Q12809 1159 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 STILQ15468 1287 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 MAP7D1Q3KQU3 841 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 PPM1JQ5JR12 505 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 STPG1Q5TH74 334 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 SDE2Q6IQ49 451 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 LPCAT2Q7L5N7 544 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 FMNL3Q8IVF7 1028 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 ARHGEF19Q8IW93 802 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 SCML4Q8N228 414 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 CPXM2Q8N436 756 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 DDX1Q92499 740 aaKnown RBP23.23■■□□□ 1.31
SCARB1-206ENST00000539320 ACOX2Q99424 681 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 GABRG3Q99928 467 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 EDEM2Q9BV94 578 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 SLC27A6Q9Y2P4 619 aa23.23■■□□□ 1.31
SCARB1-206ENST00000539320 HBS1LQ9Y450 684 aaKnown RBP23.23■■□□□ 1.31
SCARB1-206ENST00000539320 A0A1W2PQF6 199 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 YJEFN3A6XGL0 299 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 E7ENQ6 273 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 AFPP02771 609 aaKnown RBP23.22■■□□□ 1.31
SCARB1-206ENST00000539320 CYBBP04839 570 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 LCP1P13796 627 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 RGS7P49802 495 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 ZNF132P52740 706 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 MFAP3P55082 362 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 DAOAP59103 153 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 TRIP4Q15650 581 aaPredicted RBP23.22■■□□□ 1.31
SCARB1-206ENST00000539320 BSPRYQ5W0U4 402 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms