RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FEN1P39748 380 aaKnown RBP10.22□□□□□ -0.77
COL4A6-208ENST00000538570 NFIL3Q16649 462 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 C11orf88Q6PI97 169 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 B3GNT6Q6ZMB0 384 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 PRR23CQ6ZRP0 262 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 ZNF614Q8N883 585 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 MAP3K14Q99558 947 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 TARS2Q9BW92 718 aaKnown RBP10.22□□□□□ -0.77
COL4A6-208ENST00000538570 PLA2G12BQ9BX93 195 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 RXFP1Q9HBX9 757 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 AVENQ9NQS1 362 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-208ENST00000538570 UBQLN1Q9UMX0 589 aaKnown RBP10.22□□□□□ -0.77
COL4A6-208ENST00000538570 L1RE1Q9UN81 338 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 DYRK3O43781 588 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 FAM20BO75063 409 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 ENTPD3O75355 529 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 SLC25A27O95847 323 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 IL5RAQ01344 420 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 ATXN10Q9UBB4 475 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 STK39Q9UEW8 545 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 SLC25A13Q9UJS0 675 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 PADI4Q9UM07 663 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 TRPM1Q7Z4N2 1603 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 CENPXA8MT69 81 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 LRG1P02750 347 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 S100A6P06703 90 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 PCNAP12004 261 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 SLC34A1Q06495 639 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 USP49Q70CQ1 688 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 ZNF438Q7Z4V0 828 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 SLC22A9Q8IVM8 553 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 WDR36Q8NI36 951 aaKnown RBP10.22□□□□□ -0.77
COL4A6-208ENST00000538570 APBB2Q92870 758 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 MLPHQ9BV36 600 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-208ENST00000538570 CLPBQ9H078 707 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 STN1Q9H668 368 aaKnown RBP10.22□□□□□ -0.77
COL4A6-208ENST00000538570 TULP4Q9NRJ4 1543 aa10.22□□□□□ -0.77
COL4A6-208ENST00000538570 UNC13BO14795 1591 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 PNPLA6Q8IY17 1366 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 PIPSLA2A3N6 862 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 GAS2O43903 313 aaKnown RBP10.21□□□□□ -0.77
COL4A6-208ENST00000538570 KLHL41O60662 606 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 PLEKP08567 350 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-208ENST00000538570 PRLRP16471 622 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 VAC14Q08AM6 782 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 SNAPC2Q13487 334 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 DDR2Q16832 855 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 TBCELQ5QJ74 424 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 TBC1D16Q8TBP0 767 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 FAM120BQ96EK7 910 aaKnown RBP10.21□□□□□ -0.77
COL4A6-208ENST00000538570 PARK7Q99497 189 aaKnown RBP10.21□□□□□ -0.77
COL4A6-208ENST00000538570 TSPAN4O14817 238 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 CPA3P15088 417 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 RUNDC3AQ59EK9 446 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 TRIQKQ629K1 86 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 TYW3Q6IPR3 259 aaKnown RBP10.21□□□□□ -0.77
COL4A6-208ENST00000538570 TMEM26Q6ZUK4 368 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 SLFN11Q7Z7L1 901 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 SLC26A11Q86WA9 606 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 CLVS1Q8IUQ0 354 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-208ENST00000538570 REXO1L1PQ8IX06 675 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 TINF2Q9BSI4 451 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 CEP44Q9C0F1 390 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 JMJD4Q9H9V9 463 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 NCKIPSDQ9NZQ3 722 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 SLC24A2Q9UI40 661 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 SPEF1Q9Y4P9 236 aa10.21□□□□□ -0.77
COL4A6-208ENST00000538570 GNG14A0A1W2PPG7 69 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 FAM47E-STBD1D6RA91 191 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 FSBPO95073 299 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 CRTAMO95727 393 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 VDRP11473 427 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 VCLP18206 1134 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 TRMT5Q32P41 509 aaKnown RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 C16orf62Q7Z3J2 963 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 SVOPQ8N4V2 548 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 B3GALNT2Q8NCR0 500 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 ACTRT1Q8TDG2 376 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 EMILIN2Q9BXX0 1053 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 CDC42EP4Q9H3Q1 356 aaKnown RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 KCNH7Q9NS40 1196 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 KIAA1257Q9ULG3 409 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 RBMX2Q9Y388 322 aaKnown RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 HPGDP15428 266 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 BGNP21810 368 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 PSMB9P28065 219 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 GRK3P35626 688 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 C15orf59Q2T9L4 293 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 RABL6Q3YEC7 729 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 C11orf63Q6NUN7 778 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 CHST13Q8NET6 341 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 ROGDIQ9GZN7 287 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 FAM220BPB1ANY3 271 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-208ENST00000538570 PLA2G6O60733 806 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 MPOP05164 745 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 FASP25445 335 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 FLT3P36888 993 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 CPT1AP50416 773 aa10.21□□□□□ -0.78
COL4A6-208ENST00000538570 ERVK-24P63145 666 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms