RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SLC18A2Q05940 514 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 KRT81Q14533 505 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 MFSD10Q14728 455 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 TPSAB1Q15661 275 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 BBS9Q3SYG4 887 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 SPDYAQ5MJ70 313 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 FBXO47Q5MNV8 452 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 HP1BP3Q5SSJ5 553 aaPredicted RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 PRAMEF19Q5SWL8 479 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 SWT1Q5T5J6 900 aaKnown RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 CYB5D1Q6P9G0 228 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 SH2D5Q6ZV89 423 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 STRADAQ7RTN6 431 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 IGDCC3Q8IVU1 814 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 CDKL3Q8IVW4 592 aaPredicted RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 BANPQ8N9N5 519 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 MCUQ8NE86 351 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 MAGEC3Q8TD91 643 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 SLC44A1Q8WWI5 657 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 BADQ92934 168 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 TRIM43Q96BQ3 446 aaPredicted RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 HSFY1Q96LI6 401 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 ZNF560Q96MR9 790 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 CYTH2Q99418 400 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 OSMRQ99650 979 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 DPEP3Q9H4B8 488 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 NXF3Q9H4D5 531 aaKnown RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 PRDM5Q9NQX1 630 aaPredicted RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 KLC4Q9NSK0 619 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 FAM49BQ9NUQ9 324 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 GPATCH2LQ9NWQ4 482 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 TTLL3Q9Y4R7 772 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 KAT6AQ92794 2004 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 SMIM28A0A1B0GU29 152 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 KBTBD13C9JR72 458 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 H7C0C1 242 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 PIK3R2O00459 728 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 SPTLC1O15269 473 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 TM9SF1O15321 606 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 DAB1O75553 588 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 GCATO75600 419 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 GRAP2O75791 330 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 IL1BP01584 269 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 MYCNP04198 464 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 ATP2A2P16615 1042 aaKnown RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 ZFXP17010 805 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 DESP17661 470 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 WARSP23381 471 aaKnown RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 PRKCHP24723 683 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 CYP2F1P24903 491 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 RBL1P28749 1068 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 RPA3P35244 121 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 CCNFP41002 786 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 MSH2P43246 934 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 ATP5OP48047 213 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 NR2C2P49116 596 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 PSEN2P49810 448 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 NEK3P51956 506 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 BCAR1P56945 870 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 ELF3P78545 371 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 BASP1P80723 227 aaKnown RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 RIPK1Q13546 671 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 SNX17Q15036 470 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 ZKSCAN8Q15776 578 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 CDO1Q16878 200 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 MFSD14CQ5VZR4 134 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 C1orf228Q6PIY5 440 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 SLC39A5Q6ZMH5 540 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 CAPN12Q6ZSI9 719 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 C3orf62Q6ZUJ4 267 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 ZNF534Q76KX8 674 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 DPH6Q7L8W6 267 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 CAND1Q86VP6 1230 aaKnown RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 OSTM1Q86WC4 334 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 CHSY1Q86X52 802 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 ECHDC2Q86YB7 292 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 PSTKQ8IV42 348 aaKnown RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 PALM2Q8IXS6 379 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 C4orf33Q8N1A6 199 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 FITM2Q8N6M3 262 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 TOP6BLQ8N6T0 577 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 C7orf31Q8N865 590 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 CCDC63Q8NA47 563 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 OR6B3Q8NGW1 331 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 ZNF398Q8TD17 642 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 LENG1Q96BZ8 264 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 LRRC39Q96DD0 335 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 RMDN2Q96LZ7 410 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 QKIQ96PU8 341 aaKnown RBP eCLIP9.59□□□□□ -0.87
DDB1-211ENST00000538280 LBHD1Q9BQE6 289 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 PITPNM3Q9BZ71 974 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 FAM49AQ9H0Q0 323 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 NRDE2Q9H7Z3 1164 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 PLAC1Q9HBJ0 212 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 POPDC2Q9HBU9 364 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 NGRNQ9NPE2 291 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms