RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TEX44Q53QW1 395 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 GPR107Q5VW38 600 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 SH2D5Q6ZV89 423 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 IGFN1Q86VF2 1251 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 MCF2L2Q86YR7 1114 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 RAPGEF4Q8WZA2 1011 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 THEGQ9P2T0 379 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 PSMD13Q9UNM6 376 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 JAG2Q9Y219 1238 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 SNX9Q9Y5X1 595 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 MYH9P35579 1960 aaKnown RBP11.04□□□□□ -0.64
RTN3-208ENST00000537981 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 BPTFQ12830 3046 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 TCRBV7S3A2A0A539 114 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 IQCA1LA6NCM1 817 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 DNALI1O14645 258 aaPredicted RBP11.04□□□□□ -0.64
RTN3-208ENST00000537981 CSPG5O95196 566 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 CHEK2O96017 543 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 TCF4P15884 667 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 PSMC3P17980 439 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 GYG1P46976 350 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 CYP2J2P51589 502 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 ARSEP51690 589 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
RTN3-208ENST00000537981 DNASE1L3Q13609 305 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 PGS1Q32NB8 556 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 MAVSQ7Z434 540 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 IGDCC3Q8IVU1 814 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 DEPDC4Q8N2C3 294 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 FAM156AQ8NDB6 213 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 CAPSLQ8WWF8 208 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 DCP1AQ9NPI6 582 aaPredicted RBP11.04□□□□□ -0.64
RTN3-208ENST00000537981 KLQ9UEF7 1012 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 SLC27A5Q9Y2P5 690 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 ZNF536O15090 1300 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 GCNT3O95395 438 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 APOEP02649 317 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 GNAO1P09471 354 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 KCNA2P16389 499 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 XRCC1P18887 633 aaPredicted RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 COPAP53621 1224 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 CSE1LP55060 971 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 TPTEP56180 551 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 RPL26P61254 145 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 MRPS5P82675 430 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 MS4A2Q01362 244 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 GRIK5Q16478 980 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 RGS21Q2M5E4 152 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 ANKRD26P1Q6NSI1 321 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 SLC30A10Q6XR72 485 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 CHSY1Q86X52 802 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 FBXW8Q8N3Y1 598 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 CPSF7Q8N684 471 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 PAF1Q8N7H5 531 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 ACSF2Q96CM8 615 aaPredicted RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 LRGUKQ96M69 825 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 CCSER2Q9H7U1 834 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 AASDHPPTQ9NRN7 309 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 GID8Q9NWU2 228 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 DKK3Q9UBP4 350 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 ANAPC7Q9UJX3 599 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 AGO2Q9UKV8 859 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 ERGIC3Q9Y282 383 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 H3BNH8 94 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 BAIAP3O94812 1187 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 KCNH1O95259 989 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 H6PDO95479 791 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 ERBB2P04626 1255 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 SERPINA6P08185 405 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 SLC5A1P13866 664 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 AOC1P19801 751 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 NMT1P30419 496 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 MAN1A1P33908 653 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 BMPR1AP36894 532 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 PKNOX1P55347 436 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 TAS2R40P59535 323 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 CCDC58Q4VC31 144 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 IL23RQ5VWK5 629 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 GALNT18Q6P9A2 607 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 ZC3H7AQ8IWR0 971 aaKnown RBP11.03□□□□□ -0.64
RTN3-208ENST00000537981 FIBCD1Q8N539 461 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 ZSWIM2Q8NEG5 633 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 LMO3Q8TAP4 145 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 PLA2G12BQ9BX93 195 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 SLC13A1Q9BZW2 595 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 RNF38Q9H0F5 515 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 WWP1Q9H0M0 922 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 Q9H521 79 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 PI4KBQ9UBF8 816 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 LIMD1Q9UGP4 676 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 BCAP29Q9UHQ4 241 aa11.03□□□□□ -0.64
RTN3-208ENST00000537981 SLC24A2Q9UI40 661 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms