RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 KIF2AO00139 706 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 IRAK2O43187 625 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 COCHO43405 550 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 MOSPD3O75425 235 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 RHOP08100 348 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 RALAP11233 206 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 IGFBP4P22692 258 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 CTNNA2P26232 953 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 CA9Q16790 459 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 DNTTIP2Q5QJE6 756 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 RARS2Q5T160 578 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 SNX30Q5VWJ9 437 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PAPD7Q5XG87 772 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 MSANTD2Q6P1R3 559 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 ANKS1BQ7Z6G8 1248 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PDZD8Q8NEN9 1154 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 SHKBP1Q8TBC3 707 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 CYP2S1Q96SQ9 504 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 TRIM62Q9BVG3 475 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 ASAH2Q9NR71 780 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 SMARCAL1Q9NZC9 954 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 RASAL2Q9UJF2 1139 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 SNX12Q9UMY4 172 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PCDHA3Q9Y5H8 950 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PRRC2BQ5JSZ5 2229 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 TMEM265A0A087WTH1 108 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PI4K2BG5E9Z4 385 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 KCNK3O14649 394 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 OAS1P00973 400 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 HMBSP08397 361 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PCK1P35558 622 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PSEN1P49768 467 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 EIF4EBP2Q13542 120 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 ACAP1Q15027 740 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 HECTD3Q5T447 861 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 POTEHQ6S545 545 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 Q7L0L9 218 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 MICALL1Q8N3F8 863 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 EFHBQ8N7U6 833 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 HSPH1Q92598 858 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PGAP3Q96FM1 320 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 SNRNP25Q9BV90 132 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 ATXN3LQ9H3M9 355 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 SNX10Q9Y5X0 201 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 DOCK6Q96HP0 2047 aa16.3■□□□□ 0.2
SFSWAP-206ENST00000537582 PRPSAP2O60256 369 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 XYLBO75191 536 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 URI1O94763 535 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 CD48P09326 243 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 RARAP10276 462 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 PTPN2P17706 415 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 GGCXP38435 758 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 EPHA5P54756 1037 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 DLX2Q07687 328 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 SYCE2Q6PIF2 218 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 RTL10Q7L3V2 364 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 KIF18AQ8NI77 898 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 SMG7Q92540 1137 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 RAPGEF5Q92565 580 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 PPP2R3CQ969Q6 453 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 MS4A14Q96JA4 679 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 OSBPL9Q96SU4 736 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 SFXN1Q9H9B4 322 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 MARCH2Q9P0N8 246 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 XPO7Q9UIA9 1087 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 EYSQ5T1H1 3165 aa16.29■□□□□ 0.2
SFSWAP-206ENST00000537582 OBSL1O75147 1896 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 SLC12A8A0AV02 714 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 CCDC66A2RUB6 948 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 MIF4GDA9UHW6 222 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 PSTPIP1O43586 416 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 TBX10O75333 385 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 KRT1P04264 644 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 PYGMP11217 842 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 CXCR3P49682 368 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 TEAD2Q15562 447 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 PRSS36Q5K4E3 855 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 PDZD4Q76G19 769 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 PYROXD2Q8N2H3 581 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 MAB21L3Q8N8X9 362 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 ING5Q8WYH8 240 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 WBP2Q969T9 261 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 RNF25Q96BH1 459 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 SMG9Q9H0W8 520 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 PIDD1Q9HB75 910 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 SMPD4Q9NXE4 827 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 RRN3Q9NYV6 651 aa16.28■□□□□ 0.2
SFSWAP-206ENST00000537582 CLEC1BQ9P126 229 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms