RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TOP1MTQ969P6 601 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 RMDN3Q96TC7 470 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TASP1Q9H6P5 420 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 KLHL8Q9P2G9 620 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 IPO11Q9UI26 975 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 GIT1Q9Y2X7 761 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TRIM17Q9Y577 477 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TAF4O00268 1085 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB5O15062 677 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SLC22A1O15245 554 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 MAP3K13O43283 966 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SERPINB2P05120 415 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 GM2AP17900 193 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 FGFR3P22607 806 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 GRK2P25098 689 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CNTFP26441 200 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 IL6STP40189 918 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SERPINB9P50453 376 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ENPEPQ07075 957 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 MOGQ16653 247 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 FAXCQ5TGI0 409 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 HEATR6Q6AI08 1181 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 POTEHQ6S545 545 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TRIM72Q6ZMU5 477 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 AFG1LQ8WV93 481 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 HPS1Q92902 700 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 APOPT1Q96IL0 206 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 RAB6BQ9NRW1 208 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB1Q9Y2K1 713 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 MFN2O95140 757 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 MMP10P09238 476 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB48P10074 688 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 THRAP10827 490 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CRKLP46109 303 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CASP5P51878 434 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 NAA20P61599 178 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ITGA7Q13683 1181 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 NEPROQ6NW34 567 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TSPAN14Q8NG11 270 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ARHGEF26Q96DR7 871 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 P4HBP07237 508 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 PRDX5P30044 214 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 GTF2H1P32780 548 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CLK1P49759 484 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ATP6V0D1P61421 351 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SMTNL2Q2TAL5 461 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 RFWD3Q6PCD5 774 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZCCHC23Q6ZST2 131 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TUBA1CQ9BQE3 449 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CNPY3Q9BT09 278 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 BBS2Q9BXC9 721 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ACSS3Q9H6R3 686 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ANKHQ9HCJ1 492 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SLCO1B3Q9NPD5 702 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 MKS1Q9NXB0 559 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 GRID1Q9ULK0 1009 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 DRG1Q9Y295 367 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ATAD5Q96QE3 1844 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 M0QX08 132 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 EML1O00423 815 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 KRT7P08729 469 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CDH2P19022 906 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 AOC1P19801 751 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 HLA-DPA1P20036 260 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 BCAP31P51572 246 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 GRM1Q13255 1194 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 AP3B2Q13367 1082 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CAPRIN1Q14444 709 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SNX17Q15036 470 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 NRF1Q16656 503 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 FOXB2Q5VYV0 432 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 KLHDC10Q6PID8 442 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 C4orf22Q6V702 233 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TAS2R42Q7RTR8 314 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ALYREFQ86V81 257 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF34Q8IZ26 560 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZCCHC7Q8N3Z6 543 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB18Q99592 522 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 BCL7BQ9BQE9 202 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 NUDT12Q9BQG2 462 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 EIF2AK1Q9BQI3 630 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SNX9Q9Y5X1 595 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 MYO1GB0I1T2 1018 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 FOXN3O00409 490 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 ALOX15BO15296 676 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SERPINB7O75635 380 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 ALBP02768 609 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 PROCP04070 461 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 NPR1P16066 1061 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 EIF2AK2P19525 551 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 WDR4P57081 412 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 MRPS22P82650 360 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 PPIL2Q13356 520 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 MTERF2Q49AM1 385 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SH3D19Q5HYK7 790 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 TMTC4Q5T4D3 741 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 BNIPLQ7Z465 357 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CHPT1Q8WUD6 406 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 COG4Q9H9E3 785 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms