RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CFAP69A5D8W1 941 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 CHRNA1P02708 482 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 NPR3P17342 541 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 RPA3P35244 121 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-202ENST00000535906 RGS9BPQ6ZS82 235 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 STRADAQ7RTN6 431 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 TBC1D1Q86TI0 1168 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-202ENST00000535906 FITM2Q8N6M3 262 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 GAD1Q99259 594 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 PAIP2Q9BPZ3 127 aaKnown RBP13.87□□□□□ -0.19
VPS33B-202ENST00000535906 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 ETNK2Q9NVF9 386 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
VPS33B-202ENST00000535906 KBTBD13C9JR72 458 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 M0QZ92 97 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 GOT1P17174 413 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 RABGGTBP53611 331 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 GJA9P57773 515 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 MRPS5P82675 430 aaKnown RBP13.86□□□□□ -0.19
VPS33B-202ENST00000535906 SPARCL1Q14515 664 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 SLC25A52Q3SY17 297 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 DCAF6Q58WW2 860 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 MDH1BQ5I0G3 518 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 CLEC20AQ6ZU45 233 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 DCAKDQ8WVC6 231 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 SENP8Q96LD8 212 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 RMDN2Q96LZ7 410 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 MTG1Q9BT17 334 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-202ENST00000535906 DNAI2Q9GZS0 605 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 ETNK1Q9HBU6 452 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 TMPRSS4Q9NRS4 437 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 GRID1Q9ULK0 1009 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 STARD13Q9Y3M8 1113 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 TRPV2Q9Y5S1 764 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 USP3Q9Y6I4 520 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 TCRBV9S1A1TA0A576 114 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 TYROBPO43914 113 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 ATP6V1G2O95670 118 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 APRTP07741 180 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 CYBAP13498 195 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 NQO1P15559 274 aaKnown RBP13.86□□□□□ -0.19
VPS33B-202ENST00000535906 KRT4P19013 534 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 AMPD1P23109 780 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 SULT1E1P49888 294 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 CLCNKBP51801 687 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 YWHAZP63104 245 aaKnown RBP13.86□□□□□ -0.19
VPS33B-202ENST00000535906 MGAT5Q09328 741 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 CCDC15Q0P6D6 951 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 RIPK1Q13546 671 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 KLHL38Q2WGJ6 581 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 OTUD1Q5VV17 481 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-202ENST00000535906 NCBP2-AS2Q69YL0 99 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 C3orf58Q8NDZ4 430 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 MZB1Q8WU39 189 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 CRTAC1Q9NQ79 661 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 DDX43Q9NXZ2 648 aaKnown RBP13.86□□□□□ -0.19
VPS33B-202ENST00000535906 FZD10Q9ULW2 581 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 TIMM13Q9Y5L4 95 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-202ENST00000535906 NR2E3Q9Y5X4 410 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 HTTP42858 3142 aa13.86□□□□□ -0.19
VPS33B-202ENST00000535906 CA4P22748 312 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 MAP3K7CLP57077 242 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SLC8A3P57103 927 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SLC1A5Q15758 541 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SLC45A4Q5BKX6 768 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SYPL2Q5VXT5 272 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 KCNT2Q6UVM3 1135 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 CAND1Q86VP6 1230 aaKnown RBP13.85□□□□□ -0.19
VPS33B-202ENST00000535906 TRIB2Q92519 343 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 MED10Q9BTT4 135 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SENP6Q9GZR1 1112 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-202ENST00000535906 KLC2Q9H0B6 622 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 DTLQ9NZJ0 730 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SYNJ2BP-COX16A0A087WUM0 186 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 KPNA6O60684 536 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 METTL18O95568 372 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 THP07101 528 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SLC10A3P09131 477 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 TSHRP16473 764 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 ATP2A2P16615 1042 aaKnown RBP13.85□□□□□ -0.19
VPS33B-202ENST00000535906 ZFXP17010 805 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SLC8A1P32418 973 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 MSH2P43246 934 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 NR2C2P49116 596 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 INHBEP58166 350 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 PDK4Q16654 411 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 KBTBD12Q3ZCT8 623 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 WLSQ5T9L3 541 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 FAM47EQ6ZV65 393 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 HFE2Q6ZVN8 426 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 ECHDC2Q86YB7 292 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 KCTD13Q8WZ19 329 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 NT5C3BQ969T7 300 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 PAAF1Q9BRP4 392 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
VPS33B-202ENST00000535906 LRRC4Q9HBW1 653 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 NOD2Q9HC29 1040 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SSU72Q9NP77 194 aaKnown RBP13.85□□□□□ -0.19
VPS33B-202ENST00000535906 SLC38A7Q9NVC3 462 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms