RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 SLC8A3P57103 927 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 COG7P83436 770 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 SPEM2Q0P670 501 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 LPAL2Q16609 132 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 PLK5Q496M5 336 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 PKDCCQ504Y2 493 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 EOGTQ5NDL2 527 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 PLA2G2CQ5R387 149 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 BTBD8Q5XKL5 378 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 PRR23CQ6ZRP0 262 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 DGLUCYQ7Z3D6 616 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 PIGZQ86VD9 579 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 TTC30AQ86WT1 665 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 TMEM25Q86YD3 366 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 TRIML1Q8N9V2 468 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 IL17RCQ8NAC3 791 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 TSTD1Q8NFU3 115 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 LMO3Q8TAP4 145 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 NETO1Q8TDF5 533 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 HHIPQ96QV1 700 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 DCLK3Q9C098 648 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 DEC1Q9P2X7 70 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 NAGPAQ9UK23 515 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 FBXO10Q9UK96 956 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 USP18Q9UMW8 372 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 CKAP5Q14008 2032 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 ACACBO00763 2458 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 LAMA1P25391 3075 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 O00370 1275 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 SCAMP3O14828 347 aaKnown RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 SLC30A4O14863 429 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 GADD45BO75293 160 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 STC2O76061 302 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 RHOBTB1O94844 696 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 CCDC192P0DO97 292 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 PXNP49023 591 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 LIMK1P53667 647 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 ATXN1P54253 815 aaKnown RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 BST2Q10589 180 aaKnown RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 CETN1Q12798 172 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 USP39Q53GS9 565 aaKnown RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 SGO2Q562F6 1265 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 C2orf27AQ580R0 203 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 C10orf120Q5SQS8 335 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 TRMT11Q7Z4G4 463 aaKnown RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 KBTBD6Q86V97 674 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 TRIM59Q8IWR1 403 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 TERB1Q8NA31 727 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 NELFBQ8WX92 580 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 KCTD13Q8WZ19 329 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 NT5C1BQ96P26 610 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 XPO6Q96QU8 1125 aaKnown RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 DUSP15Q9H1R2 295 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 POLR3BQ9NW08 1133 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-202ENST00000535685 TSPAN16Q9UKR8 245 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 KNL1Q8NG31 2342 aa11.33□□□□□ -0.6
CCDC60-202ENST00000535685 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 SGK1O00141 431 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 ADAM23O75077 832 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 ALDH1A2O94788 518 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 KLF8O95600 359 aaPredicted RBP11.32□□□□□ -0.6
CCDC60-202ENST00000535685 ZBED1O96006 694 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 PENKP01210 267 aaPredicted RBP11.32□□□□□ -0.6
CCDC60-202ENST00000535685 KLKB1P03952 638 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CISD3P0C7P0 127 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 SETSIPP0DME0 302 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 IRF1P10914 325 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 HNRNPLP14866 589 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CHKAP35790 457 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 SEC13P55735 322 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 GCNT1Q02742 428 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 PDE4CQ08493 712 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 STILQ15468 1287 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CNGA2Q16280 664 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CCDC40Q4G0X9 1142 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 BHLHA9Q7RTU4 235 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 SFTPA1Q8IWL2 248 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 FAM217AQ8IXS0 508 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CPXM2Q8N436 756 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 ALLCQ8N6M5 410 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 TXNDC5Q8NBS9 432 aaKnown RBP11.32□□□□□ -0.6
CCDC60-202ENST00000535685 JAKMIP2Q96AA8 810 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 POLMQ9NP87 494 aaPredicted RBP11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CNGB3Q9NQW8 809 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 OLA1Q9NTK5 396 aaKnown RBP11.32□□□□□ -0.6
CCDC60-202ENST00000535685 HESX1Q9UBX0 185 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
CCDC60-202ENST00000535685 HCN2Q9UL51 889 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 CNTN6Q9UQ52 1028 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 SLC27A6Q9Y2P4 619 aa11.32□□□□□ -0.6
CCDC60-202ENST00000535685 ANTXRLA6NF34 631 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 GFRA2O00451 464 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 MDM4O15151 490 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 FGFR1OPO95684 399 aaKnown RBP11.31□□□□□ -0.6
CCDC60-202ENST00000535685 TYRP14679 529 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 P2RY2P41231 377 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms