RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NMUR1Q9HB89 426 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 DNAJC17Q9NVM6 304 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 BCCIPQ9P287 314 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 HMGXB4Q9UGU5 601 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 SMG1Q96Q15 3661 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 HELZ2Q9BYK8 2649 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 C10orf142B7Z368 130 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 TRIM24O15164 1050 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ZBTB24O43167 697 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 OPHN1O60890 802 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 CBFA2T3O75081 653 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 STC2O76061 302 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 HLA-DRAP01903 254 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 KLKB1P03952 638 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 CCDC130P13994 396 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 CASP1P29466 404 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 OXTRP30559 389 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 RDXP35241 583 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 DGKGP49619 791 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 MFAP3P55082 362 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 MAP3K7CLP57077 242 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ZNF445P59923 1031 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ANO4Q32M45 955 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 KMT5BQ4FZB7 885 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ZCWPW2Q504Y3 356 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 WDR45BQ5MNZ6 344 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ARHGAP17Q68EM7 881 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 KIAA1211LQ6NV74 962 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 GPRIN1Q7Z2K8 1008 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 CEP57L1Q8IYX8 460 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 CHPFQ8IZ52 775 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ARHGAP18Q8N392 663 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 GUF1Q8N442 669 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 NAT16Q8N8M0 369 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 TTC16Q8NEE8 873 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 DEFB124Q8NES8 71 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ADAMTS14Q8WXS8 1223 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 ACOX2Q99424 681 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 MED10Q9BTT4 135 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 NIF3L1Q9GZT8 377 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 APOBEC3GQ9HC16 384 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 WSB2Q9NYS7 404 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 DKK4Q9UBT3 224 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 FRMD4BQ9Y2L6 1034 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 COQ4Q9Y3A0 265 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 PCDHGB2Q9Y5G2 931 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 NBEAQ8NFP9 2946 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 CELSR3Q9NYQ7 3312 aa11.8□□□□□ -0.52
CLSTN3-206ENST00000535668 SRRM3A6NNA2 597 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 NEDD8-MDP1E9PL57 170 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 LATS1O95835 1130 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 RARGP13631 454 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 CD6P30203 668 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 ME1P48163 572 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 VAMP7P51809 220 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 FOXC1Q12948 553 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 EDRF1Q3B7T1 1238 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 COBLL1Q53SF7 1204 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 SYCP2LQ5T4T6 812 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 TOGARAM2Q6ZUX3 1019 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 KIAA0907Q7Z7F0 614 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 HDDC3Q8N4P3 179 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 MINDY1Q8N5J2 469 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 BAHD1Q8TBE0 780 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 IMPG2Q9BZV3 1241 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 NACA2Q9H009 215 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 TMEM8AQ9HCN3 771 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 EXOC1Q9NV70 894 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 MYH10P35580 1976 aa11.79□□□□□ -0.52
CLSTN3-206ENST00000535668 ASXL3Q9C0F0 2248 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 A0A1W2PQH9 124 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 SCAMP3O14828 347 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 CYP26A1O43174 497 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 CALUO43852 315 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 RALAP11233 206 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 GNSP15586 552 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 AFMP43652 599 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 SIM1P81133 766 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 PPP3CAQ08209 521 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 TRIP4Q15650 581 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 MPP7Q5T2T1 576 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 KRT39Q6A163 491 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 TRIML1Q8N9V2 468 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 ANKRD52Q8NB46 1076 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 TAS1R2Q8TE23 839 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 MKRN2Q9H000 416 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 FBRSQ9HAH7 460 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 STON1Q9Y6Q2 735 aa11.78□□□□□ -0.52
CLSTN3-206ENST00000535668 URB1O60287 2271 aaKnown RBP11.77□□□□□ -0.52
CLSTN3-206ENST00000535668 A0A1B0GTW7 788 aa11.77□□□□□ -0.53
CLSTN3-206ENST00000535668 METTL12A8MUP2 240 aa11.77□□□□□ -0.53
CLSTN3-206ENST00000535668 PMM2O15305 246 aa11.77□□□□□ -0.53
CLSTN3-206ENST00000535668 PAPSS1O43252 624 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-206ENST00000535668 TOP3BO95985 862 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-206ENST00000535668 PSMC2P35998 433 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-206ENST00000535668 ATXN3P54252 364 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms