RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 NLRC4Q9NPP4 1024 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 HPS4Q9NQG7 708 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TBC1D23Q9NUY8 699 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 RNF19AQ9NV58 838 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 HYPKQ9NX55 129 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 FETUBQ9UGM5 382 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 VPS4AQ9UN37 437 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 AP4E1Q9UPM8 1137 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 OAS3Q9Y6K5 1087 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 AFF2P51816 1311 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PCDH11XQ9BZA7 1347 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PCDH11YQ9BZA8 1340 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PDS5BQ9NTI5 1447 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 LRRC9Q6ZRR7 1453 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 KDM5DQ9BY66 1539 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ARHGEF37A1IGU5 675 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 KLRG2A4D1S0 409 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 OR6C74A6NCV1 312 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ARGFXA6NJG6 315 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 STMND1H3BQB6 276 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 LAD1O00515 517 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PER2O15055 1255 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 KCNN4O15554 427 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 AQP9O43315 295 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 AKAP10O43572 662 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 SSX5O60225 188 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PIP5K1CO60331 668 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PAGE1O75459 146 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 KLHL18O94889 574 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 IFNA16P05015 189 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 IL6P05231 212 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 LYNP07948 512 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PDHA1P08559 390 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 GSTP1P09211 210 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 FAM228BP0C875 321 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 SLC2A3P11169 496 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 NR1D1P20393 614 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 RPS6KB1P23443 525 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 CCNE1P24864 410 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 HTR7P34969 479 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PPP1R2P41236 205 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 RAP1GDS1P52306 607 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 EPHB1P54762 984 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 GNG11P61952 73 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 TFAP4Q01664 338 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 RHAGQ02094 409 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 GHRHRQ02643 423 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PRKCQQ04759 706 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 STX3Q13277 289 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 AP3B2Q13367 1082 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PDCLQ13371 301 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 DMC1Q14565 340 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 LPIN1Q14693 890 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 RFTN1Q14699 578 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 SKIDA1Q1XH10 827 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 GTDC1Q4AE62 458 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 XKR9Q5GH70 373 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 TCHHL1Q5QJ38 904 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PM20D1Q6GTS8 502 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PPP1R2P3Q6NXS1 205 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PRMT9Q6P2P2 845 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 C1orf228Q6PIY5 440 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PRR23BQ6ZRT6 265 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ASRGL1Q7L266 308 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 MIER3Q7Z3K6 550 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 HDDC2Q7Z4H3 204 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 DTX1Q86Y01 620 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 RHPN2Q8IUC4 686 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 GALNT13Q8IUC8 556 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ERI1Q8IV48 349 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 CCDC36Q8IYA8 594 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 LRRC34Q8IZ02 419 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ELMOD2Q8IZ81 293 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 CLYBLQ8N0X4 340 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 REXO1Q8N1G1 1221 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 TAB3Q8N5C8 712 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 EIF1ADQ8N9N8 165 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 GRPEL2Q8TAA5 225 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 GIPC3Q8TF64 312 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 BORCS5Q969J3 196 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 VPS33AQ96AX1 596 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 EDC3Q96F86 508 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 LTV1Q96GA3 475 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ZNF578Q96N58 590 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 RUNDC3BQ96NL0 473 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 PIP5K1AQ99755 562 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 STK33Q9BYT3 514 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ASCC2Q9H1I8 757 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 EPC1Q9H2F5 836 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 TMEM245Q9H330 911 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 TAF1DQ9H5J8 278 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 STN1Q9H668 368 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 ATP13A3Q9H7F0 1226 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 TRIM45Q9H8W5 580 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 CNOT10Q9H9A5 744 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 KIAA1586Q9HCI6 787 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 WDR6Q9NNW5 1121 aaKnown RBP5.38□□□□□ -1.55
SNHG1-201ENST00000535076 LZTFL1Q9NQ48 299 aa5.38□□□□□ -1.55
SNHG1-201ENST00000535076 C1GALT1Q9NS00 363 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms